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BinaryCodec error with HMMRATAC #93

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NazaninHosseinkhan opened this issue Jan 10, 2022 · 0 comments
Open

BinaryCodec error with HMMRATAC #93

NazaninHosseinkhan opened this issue Jan 10, 2022 · 0 comments
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@NazaninHosseinkhan
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Dear all,

I am trying to run HMMRATAC algorithm on bam files generated from ATAC-Seq data using:

" java -jar HMMRATAC_V1.2.10_exe.jar -b data470.bam -i data470.bam.bai -g hg19.chrom.sizes.txt " command.

However, I get the following error:

Read error; BinaryCodec in readmode; file: /test/data470.bam

Can anybody help me to solve this problem?

Thank you in advance

Nazanin
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@NazaninHosseinkhan