diff --git a/cravat/websubmit/input-examples/hgvs.hg38.txt b/cravat/websubmit/input-examples/hgvs.hg38.txt new file mode 100644 index 00000000..ff057be7 --- /dev/null +++ b/cravat/websubmit/input-examples/hgvs.hg38.txt @@ -0,0 +1,9 @@ +NM_000492.4:c.2046dup +NM_007262.5:c.471_473del +NM_004333.6:c.2128-10_2128-9insC +NC_000001.11:g.7965348G>T +NM_007294.4:c.4357+2T>A +NM_000527.5:c.760C>T +NM_000422.3:c.319G>A +ENST00000231790.8:c.1A>T +ENST00000618231.3:c.9G>C \ No newline at end of file diff --git a/cravat/websubmit/nocache/index.html b/cravat/websubmit/nocache/index.html index 6b3267fb..a372522e 100644 --- a/cravat/websubmit/nocache/index.html +++ b/cravat/websubmit/nocache/index.html @@ -72,57 +72,48 @@
+
Variants - - - - - - - - - - - - - -
+
+
- Genome:
-
-
- - - + +
+ + + +
-
-
-
- + +
OR
+
+
- Example: - - -
OR
-
-
- Note: +
+ Example: +
+
+ + + +
+
+ Note:
-
-
-
+
+
 
@@ -147,10 +138,10 @@ Additional Analysis
+
+
-
-
diff --git a/cravat/websubmit/nocache/websubmit.css b/cravat/websubmit/nocache/websubmit.css index 98ea3540..256b24a7 100644 --- a/cravat/websubmit/nocache/websubmit.css +++ b/cravat/websubmit/nocache/websubmit.css @@ -109,6 +109,10 @@ code { font-size: 13px; } +.annotate-container { + margin-right: 10px; +} + .divtitle { font-family: sourcesanspro-bold; font-size: 22px; @@ -119,11 +123,6 @@ code { } .or { - position: absolute; - top: -17px; - left: 30px; - padding-top: 5px; - padding-bottom: 5px; width: 26px; color: #4b4b4b; } @@ -242,7 +241,17 @@ button { .variant-input-border-bottom { position: relative; border-bottom: 1px dotted #cbcbcb; - padding-bottom: 20px; + padding-top: 1em; +} + +.flexcol { + display: flex; + flex-direction: column; +} + +.flexrow { + display: flex; + flex-direction: row; } #submitcontentdiv { @@ -250,11 +259,19 @@ button { } #jobnoteinput { - width: calc(100% - 44px); + width: calc(100% - 8px); + resize: vertical; } #input-text { - width: calc(100% + 40px); + width: calc(100% - 8px); + height: 4em; + transition: all ease .2s; + resize: vertical; +} + +#input-text.input-text-selected { + height: 15em; } #refresh-jobs-table-btn { @@ -517,19 +534,24 @@ input:checked + .slider:before { } .input-example-button { - width: 35px; - height: 23px; + min-width: 35px; font-size: 11px; background-color: #6e593a; + padding: 3px 6px; +} + +.input-label { + font-size: 13px; + margin-top: 0.3em; } .submit-annotate-button { font-size: 24px; - width: 391px; + width: 100%; padding: 9px; background-color: #de6342; - position: absolute; - left: 1px; + margin-left: 0; + margin-top: 1em; } .launch-button { @@ -766,9 +788,6 @@ input:checked + .slider:before { } .chevron2to3 { - position: relative; - top: -30px; - left: 329px; } .chevron2to3:before { @@ -908,8 +927,11 @@ input:checked + .slider:before { } #assembly-select-div { - width: fit-content; - padding: 2px; + width: 100%; +} + +#assembly-select { + width: 100%; } .fileaddbutn { diff --git a/cravat/websubmit/nocache/websubmit.js b/cravat/websubmit/nocache/websubmit.js index f5299c4b..4c9c1c1b 100644 --- a/cravat/websubmit/nocache/websubmit.js +++ b/cravat/websubmit/nocache/websubmit.js @@ -1778,12 +1778,12 @@ function populatePackageVersions () { function onClickInputTextArea () { let input = document.getElementById('input-text'); - input.rows = 20; + input.classList.add('input-text-selected') } function onBlurInputTextArea () { let input = document.getElementById('input-text'); - input.rows = 1; + input.classList.remove('input-text-selected') } function resizePage () {