In-house tools/pipelines by Kelvin Lee

For any questions, please contact:
https://github.com/KaWingLee9

Table of Contents

Data analysis pipeline

Data preprocessing of multiplexed imaging data (Python)

Small tricks and tools

Custom R visualization functions
Conver Seurat object (v4) to scanpy object (for both single-cell and spatial-omics data)
Clustering result assessment
Meta analysis