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At the moment PyCharm debugger doesn't allow to place breakpoints into snakefiles and debug it's pure python code at toplevel and in rule sections. Also debugger doesn't stop on breakpoints in python modules imported from snakefile although allows debugging snakemake library itself.
Snakemake provides some debugger support and could be used in cmdline, see "snakemake --debug" option.
Related to: How to debug the code with PyCharm? #137
The text was updated successfully, but these errors were encountered:
At the moment PyCharm debugger doesn't allow to place breakpoints into snakefiles and debug it's pure python code at toplevel and in rule sections. Also debugger doesn't stop on breakpoints in python modules imported from snakefile although allows debugging snakemake library itself.
Snakemake provides some debugger support and could be used in cmdline, see "snakemake --debug" option.
Related to: How to debug the code with PyCharm? #137
The text was updated successfully, but these errors were encountered: