From 4fea768692cfc9f7352667b76ca5f4da630aed12 Mon Sep 17 00:00:00 2001 From: Awa Synthia Date: Sat, 5 Oct 2024 00:04:49 +0300 Subject: [PATCH 1/2] added check gha action Signed-off-by: Awa Synthia --- .github/workflows/rworkflows.yml | 56 ++++++++++++++++++++++++++++++++ 1 file changed, 56 insertions(+) create mode 100644 .github/workflows/rworkflows.yml diff --git a/.github/workflows/rworkflows.yml b/.github/workflows/rworkflows.yml new file mode 100644 index 00000000..9f9936f9 --- /dev/null +++ b/.github/workflows/rworkflows.yml @@ -0,0 +1,56 @@ +name: rworkflows +'on': + push: + branches: + - master + - main + - rworkflow + pull_request: + branches: + - master + - main + - rworkflow + +jobs: + rworkflows: + permissions: write-all + runs-on: ${{ matrix.config.os }} + name: ${{ matrix.config.os }} (${{ matrix.config.r }}) + container: ${{ matrix.config.cont }} + strategy: + fail-fast: ${{ false }} + matrix: + config: + - os: ubuntu-latest + bioc: devel + r: auto + cont: ghcr.io/bioconductor/bioconductor_docker:devel + rspm: ~ + - os: macOS-latest + bioc: devel + r: auto + cont: ~ + rspm: ~ + - os: windows-latest + bioc: devel + r: auto + cont: ~ + rspm: ~ + steps: + - uses: neurogenomics/rworkflows@master + with: + run_bioccheck: ${{ false }} + run_rcmdcheck: ${{ true }} + as_cran: ${{ true }} + run_vignettes: ${{ true }} + has_testthat: ${{ true }} + run_covr: ${{ true }} + run_pkgdown: ${{ true }} + has_runit: ${{ false }} + has_latex: ${{ false }} + GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} + run_docker: ${{ false }} + DOCKER_TOKEN: ${{ secrets.DOCKER_TOKEN }} + runner_os: ${{ runner.os }} + cache_version: cache-v1 + docker_registry: ghcr.io \ No newline at end of file From 0c6bf793db691dd5f61588ec9636c2d3a3b9e7fd Mon Sep 17 00:00:00 2001 From: Awa Synthia Date: Thu, 10 Oct 2024 19:50:39 +0300 Subject: [PATCH 2/2] turn off run_pkgdown in rworkflow Signed-off-by: Awa Synthia --- .github/workflows/rworkflows.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/rworkflows.yml b/.github/workflows/rworkflows.yml index 9f9936f9..adb3886f 100644 --- a/.github/workflows/rworkflows.yml +++ b/.github/workflows/rworkflows.yml @@ -45,7 +45,7 @@ jobs: run_vignettes: ${{ true }} has_testthat: ${{ true }} run_covr: ${{ true }} - run_pkgdown: ${{ true }} + run_pkgdown: ${{ false }} has_runit: ${{ false }} has_latex: ${{ false }} GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}