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Option to show which read bases align to N's or IUPAC bases within repeat unit #25

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bw2 opened this issue Sep 14, 2021 · 0 comments
Open

Option to show which read bases align to N's or IUPAC bases within repeat unit #25

bw2 opened this issue Sep 14, 2021 · 0 comments

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@bw2
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bw2 commented Sep 14, 2021

For LocusStructures that contain 'N' or IUPAC bases like 'ARRGG', it would nice to see which bases are actually present in the reads at those positions. For example

image

knowing which bases are underneath the N positions would make it easier to check consistency with parental genotypes.
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