.gitignore

flepimop/gempyor_pkg/docs/Rinterface.nb.html
flepimop/gempyor_pkg/build/
.DS_Store
.Rhistory
.Rproj.user/
.ipynb_checkpoints/
__pycache__/
*.*.so
*.egg-info/
# ^Joseph's stuff
flepimop/gempyor_pkg/docs/full_graph*
flepimop/gempyor_pkg/docs/readable_graph*
Outcomes/test/model_output
model_output/
.idea/
# History files
.Rhistory
.Rapp.history

*.pdf
*.h5

# Session Data files
.RData

# User-specific files
.Ruserdata

# Example code in package build process
*-Ex.R

# Output files from R CMD build
/*.tar.gz

# Output files from R CMD check
/*.Rcheck/

# RStudio files
.Rproj.user
flepiMoP.Rproj
*.Rproj

# produced vignettes
vignettes/*.html
vignettes/*.pdf

# OAuth2 token, see https://github.com/hadley/httr/releases/tag/v0.3
.httr-oauth

# knitr and R markdown default cache directories
*_cache/
/cache/

# Temporary files created by R markdown
*.utf8.md
*.knit.md

# R Environment Variables
.Renviron
packrat/lib*/

# Python build dirs
#build/
dist/
SEIR.egg-info/
Outcomes.egg-info/
*venv*/
.venv/

# R package manuals
man/
flepimop/gempyor_pkg/.coverage
flepimop/gempyor_pkg/.coverage.kojis-mbp-8.sph.ad.jhsph.edu.6137.959542
flepimop/gempyor_pkg/get_value.prof
flepimop/gempyor_pkg/tests/seir/.coverage
flepimop/gempyor_pkg/tests/seir/.coverage.kojis-mbp-8.sph.ad.jhsph.edu.90615.974746
flepimop/gempyor_pkg/.coverage

# Environment variables
.env