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flepicommon-ci.yml
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name: flepicommon-ci
on:
workflow_dispatch:
push:
paths:
- flepimop/R_packages/flepicommon/**/*
branches:
- main
- dev
pull_request:
paths:
- flepimop/R_packages/flepicommon/**/*
branches:
- main
- dev
jobs:
ci:
runs-on: ubuntu-latest
strategy:
matrix:
R-version: ["4.3.3"]
steps:
- name: Checkout
uses: actions/checkout@v4
with:
lfs: true
- name: Setup R
uses: r-lib/actions/setup-r@v2
with:
r-version: ${{ matrix.R-version }}
update-rtools: true
- name: Install System Dependencies
run: sudo apt install libcurl4-openssl-dev libharfbuzz-dev libfribidi-dev libtiff5-dev
- name: Determine R Library Location
run: |
R_LIBPATH=$( R -s -e "cat(.libPaths()[1L])" | xargs )
echo "R_LIBPATH=$R_LIBPATH" >> $GITHUB_ENV
R_LIBPATH_CKSUM=$( echo "$R_LIBPATH" | cksum | cut -d ' ' -f 1 )
echo "R_LIBPATH_CKSUM=$R_LIBPATH_CKSUM" >> $GITHUB_ENV
CACHE_DATE=$( date -d "last Sunday" +%Y%m%d )
echo "CACHE_DATE=$CACHE_DATE" >> $GITHUB_ENV
- name: R Library Cache
uses: actions/cache@v4
with:
key: flepicommon-rlibs-${{ runner.os }}-${{ hashFiles('flepimop/R_packages/flepicommon/DESCRIPTION', 'flepimop/R_packages/flepicommon/NAMESPACE') }}-${{ env.R_LIBPATH_CKSUM }}-${{ env.CACHE_DATE }}
path: ${{ env.R_LIBPATH }}
- name: Install R Dependencies
if: steps.r-library-cache.outputs.cache-hit != 'true'
run: |
install.packages(
"devtools",
repos = "https://cloud.r-project.org",
)
library(devtools)
devtools::install_deps(
pkg = "flepimop/R_packages/flepicommon",
dependencies = TRUE
)
shell: Rscript {0}
- name: Install The flepicommon Package
run: |
if ("flepicommon" %in% installed.packages()[,"Package"]) {
devtools::uninstall(pkg = "flepicommon")
}
devtools::install(
pkg = "flepimop/R_packages/flepicommon",
args = c(getOption("devtools.install.args"), "--install-tests"),
quick = TRUE,
dependencies = TRUE,
)
shell: Rscript {0}
- name: Run Tests
run: |
library(testthat)
test_package("flepicommon")
shell: Rscript {0}