diff --git a/README.md b/README.md
index e687ee4f85..435aeaac3f 100644
--- a/README.md
+++ b/README.md
@@ -17,8 +17,9 @@ The Apollo client is implemented as a plugin for JBrowse, for more information o
 
 ![Build status](https://travis-ci.org/GMOD/Apollo.svg?branch=master)
 
+Apollo 2.0.1 [is now released](https://github.com/GMOD/Apollo/releases/tag/2.0.1).  
 
-Apollo 2.0.0 is now released! See [the announcement](http://genomearchitect.org/Apollo2_first_release)
+Apollo 2.0.0 is now released! See [the announcement](http://genomearchitect.org/Apollo2_first_release).
 
 ## Quick-start guide
 
diff --git a/application.properties b/application.properties
index 6eb9364934..4d9096bdd0 100644
--- a/application.properties
+++ b/application.properties
@@ -3,5 +3,5 @@
 app.grails.version=2.4.5
 app.name=apollo
 app.servlet.version=3.0
-app.version=2.0.1-RC8
+app.version=2.0.1
 
diff --git a/docs/Apollo2Build.md b/docs/Apollo2Build.md
index 1c84d162e0..e1809f8904 100644
--- a/docs/Apollo2Build.md
+++ b/docs/Apollo2Build.md
@@ -57,8 +57,14 @@ Also note: if there are any errors at this step, check the setup.log file for er
 Also also note: the "development mode" uses an in-memory H2 database for storing data by default. The setup guide will
 show you how to configure custom database settings.
 
+
 ## Setting up the application
 
+### Setup a production server
+
+To setup a production server (as opposed to a development server as above), you must [properly configure a servlet container like Tomcat or Jetty](Setup.md) with [sufficient memory](Troubleshooting.md#tomcat-memory).
+
+### Adding data to Apollo
 
 After we have a server setup, we will want to add a new organism to the panel. If you are a new user, you will want to
 setup this data with the jbrowse pre-processing scripts. You can see the [data loading guide](Data_loading.md) for more
@@ -72,7 +78,6 @@ bin/flatfile-to-json.pl --gff yourannotations.gff --type mRNA \
 ```
 
 
-
 ### Login to the web interface
 
 After you access your application at http://localhost:8080/apollo/ then you will be prompted for login information
diff --git a/docs/Setup.md b/docs/Setup.md
index bf2edcf17c..150dd4ba10 100644
--- a/docs/Setup.md
+++ b/docs/Setup.md
@@ -17,6 +17,9 @@ You will minimally need to have Java 7 or greater, [Grails](https://grails.org/)
 external database such as PostgreSQL or MySQL is generally used for production, but instructions for the H2 database is
 also provided.
 
+**Important note**:  The default memory for Tomcat and Jetty is insufficient to run Apollo (and most other web apps).   
+You should [increase the memory according to these instructions](Troubleshooting.md#tomcat-memory).
+
 ### Database configuration
 
 Apollo supports several database backends, and you can choose sample configurations from using H2, Postgres, or