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Fix to previous

Fix to previous #467

name: build-windows-mingw
on:
workflow_dispatch:
push:
paths-ignore:
- '**.nix'
- 'flake.lock'
pull_request:
paths-ignore:
- '**.nix'
- 'flake.lock'
concurrency: ci-windows-mingw-${{ github.ref }}
jobs:
windows-mingw:
runs-on: windows-latest
name: MSYS2 (${{ matrix.dependencies }} dependencies, ${{ matrix.msystem }})
defaults:
run:
shell: msys2 {0}
strategy:
# Allow other runners in the matrix to continue if some fail
fail-fast: false
matrix:
# msystem: [MINGW64, CLANG64]
msystem: [MINGW64]
dependencies: [bundled, external]
include:
- dependencies: external
external-packages: parpack:p
external-cmake-flags: -DEXTERNAL_UMFPACK=ON -DEXTERNAL_ARPACK=ON -DEXTERNAL_PARPACK=ON
steps:
- name: get CPU name
shell: pwsh
run : |
Get-CIMInstance -Class Win32_Processor | Select-Object -Property Name
- name: checkout repository
uses: actions/checkout@v4
with:
submodules: recursive
- name: install dependencies
uses: msys2/setup-msys2@v2
with:
msystem: ${{ matrix.msystem }}
update: true
install: >-
base-devel
git
pacboy: >-
cc:p
fc:p
cmake:p
msmpi:p
openblas:p
parmetis:p
mumps:p
suitesparse:p
qt6-declarative:p
qwt-qt6:p
vtk:p
adios2:p
boost:p
cgns:p
cli11:p
eigen3:p
fast_float:p
ffmpeg:p
gl2ps:p
liblas:p
libmariadbclient:p
openslide:p
openvdb:p
pdal:p
unixodbc:p
utf8cpp:p
opencascade:p
${{ matrix.external-packages }}
- name: install MSMPI
uses: mpi4py/setup-mpi@v1
with:
mpi: msmpi
- name: configure
# Downgrade incompatible-pointer-types to a warning to work around
# build error of Zoltan with newer GCC.
run: |
mkdir ${GITHUB_WORKSPACE}/build
cd ${GITHUB_WORKSPACE}/build
cmake \
-DCMAKE_BUILD_TYPE="Release" \
-DCMAKE_INSTALL_PREFIX="${GITHUB_WORKSPACE}/usr" \
-DCPACK_BUNDLE_EXTRA_WINDOWS_DLLS=OFF \
-DBLA_VENDOR="OpenBLAS" \
-DWITH_OpenMP=ON \
-DWITH_LUA=ON \
-DWITH_MPI=ON \
-DMPI_TEST_MAXPROC=2 \
-DMPIEXEC_EXECUTABLE="$(cygpath -m "${MSMPI_BIN}")/mpiexec.exe" \
-DWITH_Zoltan=ON \
-DCMAKE_C_FLAGS="-Wno-error=incompatible-pointer-types" \
-DParMetis_LIBRARIES="$(pkg-config --libs parmetis)" \
-DParMetis_INCLUDE_DIR="$(pkg-config --cflags parmetis)" \
-DWITH_Mumps=ON \
-DMumps_LIBRARIES=$(pkg-config -libs mumps-dmo) \
-DMumps_INCLUDE_DIR=$(pkg-config --variable=includedir mumps-dmo) \
-DWITH_CHOLMOD=ON \
-DWITH_ElmerIce=ON \
-DWITH_ELMERGUI=ON \
-DWITH_QT6=ON \
-DWITH_VTK=ON \
-DWITH_OCC=ON \
-DWITH_MATC=ON \
-DWITH_PARAVIEW=ON \
-DCREATE_PKGCONFIG_FILE=ON \
${{ matrix.external-cmake-flags }} \
..
- name: build
run: |
cd ${GITHUB_WORKSPACE}/build
cmake --build . -j$(nproc)
- name: install
run: |
cd ${GITHUB_WORKSPACE}/build
cmake --install .
- name: check
id: run-ctest
timeout-minutes: 150
env:
CTEST_OUTPUT_ON_FAILURE: 1
run: |
cd ${GITHUB_WORKSPACE}/build
ctest . \
-LE slow \
-j$(nproc) \
--timeout 300
- name: re-run tests
if: always() && (steps.run-ctest.outcome == 'failure')
timeout-minutes: 60
env:
CTEST_OUTPUT_ON_FAILURE: 1
run: |
cd ${GITHUB_WORKSPACE}/build
# get names of failed tests and strip potential "_np*" suffix
failed_tests=($(ctest . -N --rerun-failed | grep -E "Test\s+#.*" | awk '{print $3}' | sed -e 's/_np[0-9]*$//g'))
# remove duplicate test names
unique_failed_tests=($(echo "${failed_tests[@]}" | tr ' ' '\n' | sort -u | tr '\n' ' '))
for test in "${unique_failed_tests[@]}"; do
# check if test is from fem or ElmerIce
if [ -d fem/tests/${test} ]; then
test_root=fem/tests
else
test_root=elmerice/Tests
fi
echo "::group::Content of ${test_root}/${test}"
echo ---- Files ----
ls -Rl ${test_root}/${test}
if [ -f ${test_root}/${test}/test-stderr*.log ]; then
echo ---- Content of test-stderr*.log ----
cat ${test_root}/${test}/test-stderr*.log
fi
if [ -f ${test_root}/${test}/test-stdout*.log ]; then
echo ---- Content of test-stdout*.log ----
cat ${test_root}/${test}/test-stdout*.log
fi
echo "::endgroup::"
done
echo "::group::Re-run failing tests"
ctest --rerun-failed --output-on-failure --timeout 180 || true
echo "::endgroup::"
echo "::group::Log from these tests"
[ ! -f Testing/Temporary/LastTest.log ] || cat Testing/Temporary/LastTest.log
echo "::endgroup::"