diff --git a/segway.croo.json b/segway.croo.json new file mode 100644 index 0000000..984dbe6 --- /dev/null +++ b/segway.croo.json @@ -0,0 +1,86 @@ +{ + "segway.bed_to_bigbed": { + "bigbed": { + "table": "segway bigbed file from task bed_to_bigbed" + } + }, + "segway.interpretation": { + "classifier_data": { + "table": "calssifier data from interpretation" + }, + "classifier_probailities": { + "table": "classifier probailities from interpretation" + }, + "memonics": { + "table": "memonics txt file from interpretation" + }, + "stats": { + "table": "stats files from interpretation" + } + }, + "segway.make_genomedata": { + "genomedata": { + "table": "genomedata from task make_genomedata" + } + }, + "segway.make_trackname_assay": { + "trackname_assay": { + "table": "trackname assay from make trackname assay" + } + }, + "segway.recolor_bed": { + "recolored_bed": { + "table": "recolored bed" + } + }, + "segway.relabel": { + "relabeled_bed": { + "table": "relabeled bed" + } + }, + "segway.segtools": { + "feature_aggregation_info": { + "table": "feature aggregation info from segtools" + }, + "feature_aggregation_tab": { + "table": "feature aggregation from segtools" + }, + "gmtk_info": { + "table": "gmtk parameters info from segtools" + }, + "length_distribution_info": { + "table": "length distribution info from segtools" + }, + "length_distribution_tab": { + "table": "length distribution from segtools" + }, + "segment_sizes_tab": { + "table": "segment sizes from segtools" + }, + "signal_distribution_info": { + "table": "signal distribution files from segtools" + }, + "signal_distribution_tab": { + "table": "signal distribution from segtools" + } + }, + "segway.segway_annotate": { + "identifydir": { + "table": "identifydir tar file from segway_annotate" + }, + "output_bed": { + "table": "segway annotate bed file from task segway_annotate" + }, + "segway_params": { + "table": "params from segway_annotate" + } + }, + "segway.segway_train": { + "traindir": { + "table": "segwayTrain tar file from task segway_train" + }, + "trained_params": { + "table": "params file from task segway_train" + } + } +}