diff --git a/workflows/VGP-assembly-v2/Export-WF6/Export_WF6_Purgedups.ga b/workflows/VGP-assembly-v2/Export-WF6/Export_WF6_Purgedups.ga
index 60565559a..a7cdf5a26 100644
--- a/workflows/VGP-assembly-v2/Export-WF6/Export_WF6_Purgedups.ga
+++ b/workflows/VGP-assembly-v2/Export-WF6/Export_WF6_Purgedups.ga
@@ -237,10 +237,10 @@
             "inputs": [
                 {
                     "description": " With the dataset tag : p1 ",
-                    "name": "Purged Primary assembly"
+                    "name": "Purged Primary assembly fasta"
                 }
             ],
-            "label": "Purged Primary assembly",
+            "label": "Purged Primary assembly fasta",
             "name": "Input dataset",
             "outputs": [],
             "position": {
@@ -696,10 +696,10 @@
             "inputs": [
                 {
                     "description": " With the dataset tag  : p2 ",
-                    "name": "Purged alternate assembly"
+                    "name": "Purged alternate assembly fasta"
                 }
             ],
-            "label": "Purged alternate assembly",
+            "label": "Purged alternate assembly fasta",
             "name": "Input dataset",
             "outputs": [],
             "position": {
@@ -769,11 +769,65 @@
             "workflow_outputs": []
         },
         "28": {
-            "annotation": " With the collection tag merqury_p_qv",
+            "annotation": " With the dataset tag : p1_gfa ",
             "content_id": null,
             "errors": null,
             "id": 28,
             "input_connections": {},
+            "inputs": [
+                {
+                    "description": " With the dataset tag : p1_gfa ",
+                    "name": "Purged Primary assembly gfa "
+                }
+            ],
+            "label": "Purged Primary assembly gfa ",
+            "name": "Input dataset",
+            "outputs": [],
+            "position": {
+                "left": 1524.1249317808754,
+                "top": 3323.494635631674
+            },
+            "tool_id": null,
+            "tool_state": "{\"optional\": false, \"tag\": \"p1_gfa\"}",
+            "tool_version": null,
+            "type": "data_input",
+            "uuid": "4f38c854-f6a5-43a2-a36d-6e41496fa159",
+            "when": null,
+            "workflow_outputs": []
+        },
+        "29": {
+            "annotation": " With the dataset tag  : p2_gfa",
+            "content_id": null,
+            "errors": null,
+            "id": 29,
+            "input_connections": {},
+            "inputs": [
+                {
+                    "description": " With the dataset tag  : p2_gfa",
+                    "name": "Purged alternate assembly gfa"
+                }
+            ],
+            "label": "Purged alternate assembly gfa",
+            "name": "Input dataset",
+            "outputs": [],
+            "position": {
+                "left": 2076.2193699847926,
+                "top": 3488.4733671086638
+            },
+            "tool_id": null,
+            "tool_state": "{\"optional\": false, \"tag\": \"p2_gfa\"}",
+            "tool_version": null,
+            "type": "data_input",
+            "uuid": "1931e6df-e54e-476b-a0ec-95e6d1d2697e",
+            "when": null,
+            "workflow_outputs": []
+        },
+        "30": {
+            "annotation": " With the collection tag merqury_p_qv",
+            "content_id": null,
+            "errors": null,
+            "id": 30,
+            "input_connections": {},
             "inputs": [
                 {
                     "description": " With the collection tag merqury_p_qv",
@@ -795,11 +849,11 @@
             "when": null,
             "workflow_outputs": []
         },
-        "29": {
+        "31": {
             "annotation": "",
             "content_id": null,
             "errors": null,
-            "id": 29,
+            "id": 31,
             "input_connections": {},
             "inputs": [
                 {
@@ -822,11 +876,11 @@
             "when": null,
             "workflow_outputs": []
         },
-        "30": {
+        "32": {
             "annotation": " With the collection tag merqury_p_png",
             "content_id": null,
             "errors": null,
-            "id": 30,
+            "id": 32,
             "input_connections": {},
             "inputs": [
                 {
@@ -849,11 +903,11 @@
             "when": null,
             "workflow_outputs": []
         },
-        "31": {
+        "33": {
             "annotation": " With the collection tag merqury_p_stats",
             "content_id": null,
             "errors": null,
-            "id": 31,
+            "id": 33,
             "input_connections": {},
             "inputs": [
                 {
@@ -876,11 +930,11 @@
             "when": null,
             "workflow_outputs": []
         },
-        "32": {
+        "34": {
             "annotation": "",
             "content_id": null,
             "errors": null,
-            "id": 32,
+            "id": 34,
             "input_connections": {},
             "inputs": [
                 {
@@ -903,9 +957,9 @@
             "when": null,
             "workflow_outputs": []
         },
-        "33": {
+        "35": {
             "annotation": "",
-            "id": 33,
+            "id": 35,
             "input_connections": {
                 "0:Input parameter": {
                     "id": 0,
@@ -1095,9 +1149,9 @@
             "when": null,
             "workflow_outputs": []
         },
-        "34": {
+        "36": {
             "annotation": "",
-            "id": 34,
+            "id": 36,
             "input_connections": {
                 "0:Input parameter": {
                     "id": 1,
@@ -1287,11 +1341,11 @@
             "when": null,
             "workflow_outputs": []
         },
-        "35": {
+        "37": {
             "annotation": "",
             "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/compress_file/compress_file/0.1.0",
             "errors": null,
-            "id": 35,
+            "id": 37,
             "input_connections": {
                 "input": {
                     "id": 6,
@@ -1339,11 +1393,11 @@
             "when": null,
             "workflow_outputs": []
         },
-        "36": {
+        "38": {
             "annotation": "",
             "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/compress_file/compress_file/0.1.0",
             "errors": null,
-            "id": 36,
+            "id": 38,
             "input_connections": {
                 "input": {
                     "id": 8,
@@ -1384,11 +1438,11 @@
             "when": null,
             "workflow_outputs": []
         },
-        "37": {
+        "39": {
             "annotation": "",
             "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/compress_file/compress_file/0.1.0",
             "errors": null,
-            "id": 37,
+            "id": 39,
             "input_connections": {
                 "input": {
                     "id": 25,
@@ -1436,11 +1490,11 @@
             "when": null,
             "workflow_outputs": []
         },
-        "38": {
+        "40": {
             "annotation": "",
             "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/compress_file/compress_file/0.1.0",
             "errors": null,
-            "id": 38,
+            "id": 40,
             "input_connections": {
                 "input": {
                     "id": 27,
@@ -1488,11 +1542,11 @@
             "when": null,
             "workflow_outputs": []
         },
-        "39": {
+        "41": {
             "annotation": "",
-            "content_id": "__SORTLIST__",
+            "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/compress_file/compress_file/0.1.0",
             "errors": null,
-            "id": 39,
+            "id": 41,
             "input_connections": {
                 "input": {
                     "id": 28,
@@ -1501,6 +1555,110 @@
             },
             "inputs": [],
             "label": null,
+            "name": "Compress file(s)",
+            "outputs": [
+                {
+                    "name": "output_file",
+                    "type": "gz"
+                }
+            ],
+            "position": {
+                "left": 1764.5246261777347,
+                "top": 3411.986493181978
+            },
+            "post_job_actions": {
+                "ChangeDatatypeActionoutput_file": {
+                    "action_arguments": {
+                        "newtype": "gfa1.gz"
+                    },
+                    "action_type": "ChangeDatatypeAction",
+                    "output_name": "output_file"
+                },
+                "HideDatasetActionoutput_file": {
+                    "action_arguments": {},
+                    "action_type": "HideDatasetAction",
+                    "output_name": "output_file"
+                }
+            },
+            "tool_id": "toolshed.g2.bx.psu.edu/repos/iuc/compress_file/compress_file/0.1.0",
+            "tool_shed_repository": {
+                "changeset_revision": "09ea79f9f260",
+                "name": "compress_file",
+                "owner": "iuc",
+                "tool_shed": "toolshed.g2.bx.psu.edu"
+            },
+            "tool_state": "{\"input\": {\"__class__\": \"ConnectedValue\"}, \"__page__\": null, \"__rerun_remap_job_id__\": null}",
+            "tool_version": "0.1.0",
+            "type": "tool",
+            "uuid": "adb8bff3-2a52-4d3e-a5fc-32d9c608ce75",
+            "when": null,
+            "workflow_outputs": []
+        },
+        "42": {
+            "annotation": "",
+            "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/compress_file/compress_file/0.1.0",
+            "errors": null,
+            "id": 42,
+            "input_connections": {
+                "input": {
+                    "id": 29,
+                    "output_name": "output"
+                }
+            },
+            "inputs": [],
+            "label": null,
+            "name": "Compress file(s)",
+            "outputs": [
+                {
+                    "name": "output_file",
+                    "type": "gz"
+                }
+            ],
+            "position": {
+                "left": 2322.512335261223,
+                "top": 3497.5266214746157
+            },
+            "post_job_actions": {
+                "ChangeDatatypeActionoutput_file": {
+                    "action_arguments": {
+                        "newtype": "gfa1.gz"
+                    },
+                    "action_type": "ChangeDatatypeAction",
+                    "output_name": "output_file"
+                },
+                "HideDatasetActionoutput_file": {
+                    "action_arguments": {},
+                    "action_type": "HideDatasetAction",
+                    "output_name": "output_file"
+                }
+            },
+            "tool_id": "toolshed.g2.bx.psu.edu/repos/iuc/compress_file/compress_file/0.1.0",
+            "tool_shed_repository": {
+                "changeset_revision": "09ea79f9f260",
+                "name": "compress_file",
+                "owner": "iuc",
+                "tool_shed": "toolshed.g2.bx.psu.edu"
+            },
+            "tool_state": "{\"input\": {\"__class__\": \"ConnectedValue\"}, \"__page__\": null, \"__rerun_remap_job_id__\": null}",
+            "tool_version": "0.1.0",
+            "type": "tool",
+            "uuid": "92a02eb7-d6d9-4b24-81ef-c02ea30a3a3f",
+            "when": null,
+            "workflow_outputs": []
+        },
+        "43": {
+            "annotation": "",
+            "content_id": "__SORTLIST__",
+            "errors": null,
+            "id": 43,
+            "input_connections": {
+                "input": {
+                    "id": 30,
+                    "output_name": "output"
+                }
+            },
+            "inputs": [],
+            "label": null,
             "name": "Sort collection",
             "outputs": [
                 {
@@ -1534,14 +1692,14 @@
             "when": null,
             "workflow_outputs": []
         },
-        "40": {
+        "44": {
             "annotation": "",
             "content_id": "__SORTLIST__",
             "errors": null,
-            "id": 40,
+            "id": 44,
             "input_connections": {
                 "input": {
-                    "id": 30,
+                    "id": 32,
                     "output_name": "output"
                 }
             },
@@ -1580,14 +1738,14 @@
             "when": null,
             "workflow_outputs": []
         },
-        "41": {
+        "45": {
             "annotation": "",
             "content_id": "__SORTLIST__",
             "errors": null,
-            "id": 41,
+            "id": 45,
             "input_connections": {
                 "input": {
-                    "id": 31,
+                    "id": 33,
                     "output_name": "output"
                 }
             },
@@ -1626,9 +1784,9 @@
             "when": null,
             "workflow_outputs": []
         },
-        "42": {
+        "46": {
             "annotation": "",
-            "id": 42,
+            "id": 46,
             "input_connections": {
                 "Assembly Method": {
                     "id": 2,
@@ -1641,12 +1799,12 @@
                     "output_name": "out1"
                 },
                 "Species ID": {
-                    "id": 34,
+                    "id": 36,
                     "input_subworkflow_step_id": 1,
                     "output_name": "text_param"
                 },
                 "Species Name": {
-                    "id": 33,
+                    "id": 35,
                     "input_subworkflow_step_id": 0,
                     "output_name": "text_param"
                 }
@@ -1656,8 +1814,8 @@
             "name": "VGP Path Creation - Haplotypes",
             "outputs": [],
             "position": {
-                "left": 871.4751707258923,
-                "top": 831.7036640803226
+                "left": 824.4966273247893,
+                "top": 932.8100885428117
             },
             "subworkflow": {
                 "a_galaxy_workflow": "true",
@@ -3569,14 +3727,14 @@
             "when": null,
             "workflow_outputs": []
         },
-        "43": {
+        "47": {
             "annotation": "",
             "content_id": "export_remote",
             "errors": null,
-            "id": 43,
+            "id": 47,
             "input_connections": {
                 "export_type|incollection": {
-                    "id": 39,
+                    "id": 43,
                     "output_name": "output"
                 }
             },
@@ -3617,14 +3775,14 @@
                 }
             ]
         },
-        "44": {
+        "48": {
             "annotation": "",
             "content_id": "export_remote",
             "errors": null,
-            "id": 44,
+            "id": 48,
             "input_connections": {
                 "export_type|incollection": {
-                    "id": 40,
+                    "id": 44,
                     "output_name": "output"
                 }
             },
@@ -3665,14 +3823,14 @@
                 }
             ]
         },
-        "45": {
+        "49": {
             "annotation": "",
             "content_id": "export_remote",
             "errors": null,
-            "id": 45,
+            "id": 49,
             "input_connections": {
                 "export_type|incollection": {
-                    "id": 41,
+                    "id": 45,
                     "output_name": "output"
                 }
             },
@@ -3713,14 +3871,14 @@
                 }
             ]
         },
-        "46": {
+        "50": {
             "annotation": "",
             "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/compose_text_param/compose_text_param/0.1.1",
             "errors": null,
-            "id": 46,
+            "id": 50,
             "input_connections": {
                 "components_0|param_type|component_value": {
-                    "id": 42,
+                    "id": 46,
                     "output_name": "purge_dups Path p1"
                 }
             },
@@ -3758,14 +3916,14 @@
                 }
             ]
         },
-        "47": {
+        "51": {
             "annotation": "",
             "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/compose_text_param/compose_text_param/0.1.1",
             "errors": null,
-            "id": 47,
+            "id": 51,
             "input_connections": {
                 "components_0|param_type|component_value": {
-                    "id": 42,
+                    "id": 46,
                     "output_name": "purge_dups Path p1"
                 }
             },
@@ -3803,14 +3961,14 @@
             "when": null,
             "workflow_outputs": []
         },
-        "48": {
+        "52": {
             "annotation": "",
             "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/compose_text_param/compose_text_param/0.1.1",
             "errors": null,
-            "id": 48,
+            "id": 52,
             "input_connections": {
                 "components_0|param_type|component_value": {
-                    "id": 42,
+                    "id": 46,
                     "output_name": "purge_dups Path p1"
                 }
             },
@@ -3848,14 +4006,14 @@
                 }
             ]
         },
-        "49": {
+        "53": {
             "annotation": "",
             "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/compose_text_param/compose_text_param/0.1.1",
             "errors": null,
-            "id": 49,
+            "id": 53,
             "input_connections": {
                 "components_0|param_type|component_value": {
-                    "id": 42,
+                    "id": 46,
                     "output_name": "purge_dups Path p1"
                 }
             },
@@ -3893,23 +4051,23 @@
             "when": null,
             "workflow_outputs": []
         },
-        "50": {
+        "54": {
             "annotation": "",
             "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/compose_text_param/compose_text_param/0.1.1",
             "errors": null,
-            "id": 50,
+            "id": 54,
             "input_connections": {
                 "components_0|param_type|component_value": {
-                    "id": 42,
+                    "id": 46,
                     "output_name": "Intermediates path"
                 },
                 "components_1|param_type|component_value": {
-                    "id": 34,
+                    "id": 36,
                     "output_name": "text_param"
                 }
             },
             "inputs": [],
-            "label": "Purged Primary assembly path",
+            "label": "Purged Primary assembly fasta path",
             "name": "Compose text parameter value",
             "outputs": [
                 {
@@ -3942,14 +4100,14 @@
                 }
             ]
         },
-        "51": {
+        "55": {
             "annotation": "",
             "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/compose_text_param/compose_text_param/0.1.1",
             "errors": null,
-            "id": 51,
+            "id": 55,
             "input_connections": {
                 "components_0|param_type|component_value": {
-                    "id": 42,
+                    "id": 46,
                     "output_name": "purge_dups Path p1"
                 }
             },
@@ -3987,14 +4145,14 @@
                 }
             ]
         },
-        "52": {
+        "56": {
             "annotation": "",
             "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/compose_text_param/compose_text_param/0.1.1",
             "errors": null,
-            "id": 52,
+            "id": 56,
             "input_connections": {
                 "components_0|param_type|component_value": {
-                    "id": 42,
+                    "id": 46,
                     "output_name": "purge_dups Path p1"
                 }
             },
@@ -4032,14 +4190,14 @@
             "when": null,
             "workflow_outputs": []
         },
-        "53": {
+        "57": {
             "annotation": "",
             "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/compose_text_param/compose_text_param/0.1.1",
             "errors": null,
-            "id": 53,
+            "id": 57,
             "input_connections": {
                 "components_0|param_type|component_value": {
-                    "id": 42,
+                    "id": 46,
                     "output_name": "purge_dups Path p1"
                 }
             },
@@ -4077,14 +4235,14 @@
                 }
             ]
         },
-        "54": {
+        "58": {
             "annotation": "",
             "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/compose_text_param/compose_text_param/0.1.1",
             "errors": null,
-            "id": 54,
+            "id": 58,
             "input_connections": {
                 "components_0|param_type|component_value": {
-                    "id": 42,
+                    "id": 46,
                     "output_name": "purge_dups Path p2"
                 }
             },
@@ -4122,14 +4280,14 @@
             "when": null,
             "workflow_outputs": []
         },
-        "55": {
+        "59": {
             "annotation": "",
             "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/compose_text_param/compose_text_param/0.1.1",
             "errors": null,
-            "id": 55,
+            "id": 59,
             "input_connections": {
                 "components_0|param_type|component_value": {
-                    "id": 42,
+                    "id": 46,
                     "output_name": "purge_dups Path p2"
                 }
             },
@@ -4167,14 +4325,14 @@
             "when": null,
             "workflow_outputs": []
         },
-        "56": {
+        "60": {
             "annotation": "",
             "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/compose_text_param/compose_text_param/0.1.1",
             "errors": null,
-            "id": 56,
+            "id": 60,
             "input_connections": {
                 "components_0|param_type|component_value": {
-                    "id": 42,
+                    "id": 46,
                     "output_name": "purge_dups Path p1"
                 }
             },
@@ -4212,14 +4370,14 @@
             "when": null,
             "workflow_outputs": []
         },
-        "57": {
+        "61": {
             "annotation": "",
             "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/compose_text_param/compose_text_param/0.1.1",
             "errors": null,
-            "id": 57,
+            "id": 61,
             "input_connections": {
                 "components_0|param_type|component_value": {
-                    "id": 42,
+                    "id": 46,
                     "output_name": "purge_dups Path p2"
                 }
             },
@@ -4257,14 +4415,14 @@
             "when": null,
             "workflow_outputs": []
         },
-        "58": {
+        "62": {
             "annotation": "",
             "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/compose_text_param/compose_text_param/0.1.1",
             "errors": null,
-            "id": 58,
+            "id": 62,
             "input_connections": {
                 "components_0|param_type|component_value": {
-                    "id": 42,
+                    "id": 46,
                     "output_name": "purge_dups Path p1"
                 }
             },
@@ -4302,14 +4460,14 @@
             "when": null,
             "workflow_outputs": []
         },
-        "59": {
+        "63": {
             "annotation": "",
             "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/compose_text_param/compose_text_param/0.1.1",
             "errors": null,
-            "id": 59,
+            "id": 63,
             "input_connections": {
                 "components_0|param_type|component_value": {
-                    "id": 42,
+                    "id": 46,
                     "output_name": "Busco p1 Path"
                 }
             },
@@ -4347,14 +4505,14 @@
                 }
             ]
         },
-        "60": {
+        "64": {
             "annotation": "",
             "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/compose_text_param/compose_text_param/0.1.1",
             "errors": null,
-            "id": 60,
+            "id": 64,
             "input_connections": {
                 "components_0|param_type|component_value": {
-                    "id": 42,
+                    "id": 46,
                     "output_name": "purge_dups Path p2"
                 }
             },
@@ -4392,14 +4550,14 @@
             "when": null,
             "workflow_outputs": []
         },
-        "61": {
+        "65": {
             "annotation": "",
             "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/compose_text_param/compose_text_param/0.1.1",
             "errors": null,
-            "id": 61,
+            "id": 65,
             "input_connections": {
                 "components_0|param_type|component_value": {
-                    "id": 42,
+                    "id": 46,
                     "output_name": "Busco p1 Path"
                 }
             },
@@ -4437,14 +4595,14 @@
                 }
             ]
         },
-        "62": {
+        "66": {
             "annotation": "",
             "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/compose_text_param/compose_text_param/0.1.1",
             "errors": null,
-            "id": 62,
+            "id": 66,
             "input_connections": {
                 "components_0|param_type|component_value": {
-                    "id": 42,
+                    "id": 46,
                     "output_name": "Busco p1 Path"
                 }
             },
@@ -4482,14 +4640,14 @@
                 }
             ]
         },
-        "63": {
+        "67": {
             "annotation": "",
             "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/compose_text_param/compose_text_param/0.1.1",
             "errors": null,
-            "id": 63,
+            "id": 67,
             "input_connections": {
                 "components_0|param_type|component_value": {
-                    "id": 42,
+                    "id": 46,
                     "output_name": "purge_dups Path p2"
                 }
             },
@@ -4527,14 +4685,14 @@
             "when": null,
             "workflow_outputs": []
         },
-        "64": {
+        "68": {
             "annotation": "",
             "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/compose_text_param/compose_text_param/0.1.1",
             "errors": null,
-            "id": 64,
+            "id": 68,
             "input_connections": {
                 "components_0|param_type|component_value": {
-                    "id": 42,
+                    "id": 46,
                     "output_name": "purge_dups Path p2"
                 }
             },
@@ -4572,14 +4730,14 @@
                 }
             ]
         },
-        "65": {
+        "69": {
             "annotation": "",
             "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/compose_text_param/compose_text_param/0.1.1",
             "errors": null,
-            "id": 65,
+            "id": 69,
             "input_connections": {
                 "components_0|param_type|component_value": {
-                    "id": 42,
+                    "id": 46,
                     "output_name": "Busco p1 Path"
                 }
             },
@@ -4617,23 +4775,23 @@
                 }
             ]
         },
-        "66": {
+        "70": {
             "annotation": "",
             "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/compose_text_param/compose_text_param/0.1.1",
             "errors": null,
-            "id": 66,
+            "id": 70,
             "input_connections": {
                 "components_0|param_type|component_value": {
-                    "id": 42,
+                    "id": 46,
                     "output_name": "Intermediates path"
                 },
                 "components_1|param_type|component_value": {
-                    "id": 34,
+                    "id": 36,
                     "output_name": "text_param"
                 }
             },
             "inputs": [],
-            "label": "Purged alternate assembly path",
+            "label": "Purged alternate assembly fasta path",
             "name": "Compose text parameter value",
             "outputs": [
                 {
@@ -4642,8 +4800,8 @@
                 }
             ],
             "position": {
-                "left": 1304.1626090611035,
-                "top": 2694.239558169877
+                "left": 1304.1562644958997,
+                "top": 2693.703837906541
             },
             "post_job_actions": {},
             "tool_id": "toolshed.g2.bx.psu.edu/repos/iuc/compose_text_param/compose_text_param/0.1.1",
@@ -4666,14 +4824,14 @@
                 }
             ]
         },
-        "67": {
+        "71": {
             "annotation": "",
             "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/compose_text_param/compose_text_param/0.1.1",
             "errors": null,
-            "id": 67,
+            "id": 71,
             "input_connections": {
                 "components_0|param_type|component_value": {
-                    "id": 42,
+                    "id": 46,
                     "output_name": "purge_dups Path p2"
                 }
             },
@@ -4711,14 +4869,14 @@
                 }
             ]
         },
-        "68": {
+        "72": {
             "annotation": "",
             "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/compose_text_param/compose_text_param/0.1.1",
             "errors": null,
-            "id": 68,
+            "id": 72,
             "input_connections": {
                 "components_0|param_type|component_value": {
-                    "id": 42,
+                    "id": 46,
                     "output_name": "purge_dups Path p2"
                 }
             },
@@ -4756,14 +4914,14 @@
                 }
             ]
         },
-        "69": {
+        "73": {
             "annotation": "",
             "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/compose_text_param/compose_text_param/0.1.1",
             "errors": null,
-            "id": 69,
+            "id": 73,
             "input_connections": {
                 "components_0|param_type|component_value": {
-                    "id": 42,
+                    "id": 46,
                     "output_name": "purge_dups Path p2"
                 }
             },
@@ -4801,14 +4959,112 @@
                 }
             ]
         },
-        "70": {
+        "74": {
             "annotation": "",
             "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/compose_text_param/compose_text_param/0.1.1",
             "errors": null,
-            "id": 70,
+            "id": 74,
             "input_connections": {
                 "components_0|param_type|component_value": {
-                    "id": 42,
+                    "id": 46,
+                    "output_name": "Intermediates path"
+                },
+                "components_1|param_type|component_value": {
+                    "id": 36,
+                    "output_name": "text_param"
+                }
+            },
+            "inputs": [],
+            "label": "Purged Primary assembly gfa path",
+            "name": "Compose text parameter value",
+            "outputs": [
+                {
+                    "name": "out1",
+                    "type": "expression.json"
+                }
+            ],
+            "position": {
+                "left": 1520.076511437583,
+                "top": 3083.4449523472285
+            },
+            "post_job_actions": {},
+            "tool_id": "toolshed.g2.bx.psu.edu/repos/iuc/compose_text_param/compose_text_param/0.1.1",
+            "tool_shed_repository": {
+                "changeset_revision": "e188c9826e0f",
+                "name": "compose_text_param",
+                "owner": "iuc",
+                "tool_shed": "toolshed.g2.bx.psu.edu"
+            },
+            "tool_state": "{\"components\": [{\"__index__\": 0, \"param_type\": {\"select_param_type\": \"text\", \"__current_case__\": 0, \"component_value\": {\"__class__\": \"ConnectedValue\"}}}, {\"__index__\": 1, \"param_type\": {\"select_param_type\": \"text\", \"__current_case__\": 0, \"component_value\": {\"__class__\": \"ConnectedValue\"}}}, {\"__index__\": 2, \"param_type\": {\"select_param_type\": \"text\", \"__current_case__\": 0, \"component_value\": \"_p1.gfa.gz\"}}], \"__page__\": null, \"__rerun_remap_job_id__\": null}",
+            "tool_version": "0.1.1",
+            "type": "tool",
+            "uuid": "5f170dfe-68f2-43b5-bc2c-bcaf2d24f4ef",
+            "when": null,
+            "workflow_outputs": [
+                {
+                    "label": null,
+                    "output_name": "out1",
+                    "uuid": "91d7cb6c-98ec-46bb-8e20-0d09b8343eec"
+                }
+            ]
+        },
+        "75": {
+            "annotation": "",
+            "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/compose_text_param/compose_text_param/0.1.1",
+            "errors": null,
+            "id": 75,
+            "input_connections": {
+                "components_0|param_type|component_value": {
+                    "id": 46,
+                    "output_name": "Intermediates path"
+                },
+                "components_1|param_type|component_value": {
+                    "id": 36,
+                    "output_name": "text_param"
+                }
+            },
+            "inputs": [],
+            "label": "Purged alternate assembly gfa path",
+            "name": "Compose text parameter value",
+            "outputs": [
+                {
+                    "name": "out1",
+                    "type": "expression.json"
+                }
+            ],
+            "position": {
+                "left": 2081.9088091752037,
+                "top": 3234.893794070894
+            },
+            "post_job_actions": {},
+            "tool_id": "toolshed.g2.bx.psu.edu/repos/iuc/compose_text_param/compose_text_param/0.1.1",
+            "tool_shed_repository": {
+                "changeset_revision": "e188c9826e0f",
+                "name": "compose_text_param",
+                "owner": "iuc",
+                "tool_shed": "toolshed.g2.bx.psu.edu"
+            },
+            "tool_state": "{\"components\": [{\"__index__\": 0, \"param_type\": {\"select_param_type\": \"text\", \"__current_case__\": 0, \"component_value\": {\"__class__\": \"ConnectedValue\"}}}, {\"__index__\": 1, \"param_type\": {\"select_param_type\": \"text\", \"__current_case__\": 0, \"component_value\": {\"__class__\": \"ConnectedValue\"}}}, {\"__index__\": 2, \"param_type\": {\"select_param_type\": \"text\", \"__current_case__\": 0, \"component_value\": \"_p2.gfa.gz\"}}], \"__page__\": null, \"__rerun_remap_job_id__\": null}",
+            "tool_version": "0.1.1",
+            "type": "tool",
+            "uuid": "c5d83477-f71c-4cab-9e8e-f911c6cdd214",
+            "when": null,
+            "workflow_outputs": [
+                {
+                    "label": null,
+                    "output_name": "out1",
+                    "uuid": "0acb8ed3-d514-485a-9740-3289a9fd7bb3"
+                }
+            ]
+        },
+        "76": {
+            "annotation": "",
+            "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/compose_text_param/compose_text_param/0.1.1",
+            "errors": null,
+            "id": 76,
+            "input_connections": {
+                "components_0|param_type|component_value": {
+                    "id": 46,
                     "output_name": "gfastats p1 path"
                 }
             },
@@ -4846,14 +5102,14 @@
                 }
             ]
         },
-        "71": {
+        "77": {
             "annotation": "",
             "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/compose_text_param/compose_text_param/0.1.1",
             "errors": null,
-            "id": 71,
+            "id": 77,
             "input_connections": {
                 "components_0|param_type|component_value": {
-                    "id": 42,
+                    "id": 46,
                     "output_name": "gfastats p2 path"
                 }
             },
@@ -4891,18 +5147,18 @@
             "when": null,
             "workflow_outputs": []
         },
-        "72": {
+        "78": {
             "annotation": "",
             "content_id": "export_remote",
             "errors": null,
-            "id": 72,
+            "id": 78,
             "input_connections": {
                 "export_type|datasets_0|infile": {
                     "id": 15,
                     "output_name": "output"
                 },
                 "export_type|datasets_0|name": {
-                    "id": 58,
+                    "id": 62,
                     "output_name": "out1"
                 },
                 "export_type|datasets_10|infile": {
@@ -4910,7 +5166,7 @@
                     "output_name": "output"
                 },
                 "export_type|datasets_10|name": {
-                    "id": 62,
+                    "id": 66,
                     "output_name": "out1"
                 },
                 "export_type|datasets_11|infile": {
@@ -4918,7 +5174,7 @@
                     "output_name": "output"
                 },
                 "export_type|datasets_11|name": {
-                    "id": 59,
+                    "id": 63,
                     "output_name": "out1"
                 },
                 "export_type|datasets_12|infile": {
@@ -4926,7 +5182,7 @@
                     "output_name": "output"
                 },
                 "export_type|datasets_12|name": {
-                    "id": 65,
+                    "id": 69,
                     "output_name": "out1"
                 },
                 "export_type|datasets_13|infile": {
@@ -4934,7 +5190,7 @@
                     "output_name": "output"
                 },
                 "export_type|datasets_13|name": {
-                    "id": 61,
+                    "id": 65,
                     "output_name": "out1"
                 },
                 "export_type|datasets_14|infile": {
@@ -4942,7 +5198,7 @@
                     "output_name": "output"
                 },
                 "export_type|datasets_14|name": {
-                    "id": 57,
+                    "id": 61,
                     "output_name": "out1"
                 },
                 "export_type|datasets_15|infile": {
@@ -4950,7 +5206,7 @@
                     "output_name": "output"
                 },
                 "export_type|datasets_15|name": {
-                    "id": 54,
+                    "id": 58,
                     "output_name": "out1"
                 },
                 "export_type|datasets_16|infile": {
@@ -4958,7 +5214,7 @@
                     "output_name": "output"
                 },
                 "export_type|datasets_16|name": {
-                    "id": 63,
+                    "id": 67,
                     "output_name": "out1"
                 },
                 "export_type|datasets_17|infile": {
@@ -4966,7 +5222,7 @@
                     "output_name": "output"
                 },
                 "export_type|datasets_17|name": {
-                    "id": 60,
+                    "id": 64,
                     "output_name": "out1"
                 },
                 "export_type|datasets_18|infile": {
@@ -4974,7 +5230,7 @@
                     "output_name": "output"
                 },
                 "export_type|datasets_18|name": {
-                    "id": 55,
+                    "id": 59,
                     "output_name": "out1"
                 },
                 "export_type|datasets_19|infile": {
@@ -4982,7 +5238,7 @@
                     "output_name": "output"
                 },
                 "export_type|datasets_19|name": {
-                    "id": 64,
+                    "id": 68,
                     "output_name": "out1"
                 },
                 "export_type|datasets_1|infile": {
@@ -4990,7 +5246,7 @@
                     "output_name": "output"
                 },
                 "export_type|datasets_1|name": {
-                    "id": 56,
+                    "id": 60,
                     "output_name": "out1"
                 },
                 "export_type|datasets_20|infile": {
@@ -4998,7 +5254,7 @@
                     "output_name": "output"
                 },
                 "export_type|datasets_20|name": {
-                    "id": 68,
+                    "id": 72,
                     "output_name": "out1"
                 },
                 "export_type|datasets_21|infile": {
@@ -5006,39 +5262,55 @@
                     "output_name": "output"
                 },
                 "export_type|datasets_21|name": {
-                    "id": 67,
+                    "id": 71,
                     "output_name": "out1"
                 },
                 "export_type|datasets_22|infile": {
-                    "id": 38,
+                    "id": 40,
                     "output_name": "output_file"
                 },
                 "export_type|datasets_22|name": {
-                    "id": 69,
+                    "id": 73,
                     "output_name": "out1"
                 },
                 "export_type|datasets_23|infile": {
-                    "id": 37,
+                    "id": 39,
                     "output_name": "output_file"
                 },
                 "export_type|datasets_23|name": {
-                    "id": 66,
+                    "id": 70,
                     "output_name": "out1"
                 },
                 "export_type|datasets_24|infile": {
-                    "id": 29,
+                    "id": 31,
                     "output_name": "output"
                 },
                 "export_type|datasets_24|name": {
-                    "id": 70,
+                    "id": 76,
                     "output_name": "out1"
                 },
                 "export_type|datasets_25|infile": {
-                    "id": 32,
+                    "id": 34,
                     "output_name": "output"
                 },
                 "export_type|datasets_25|name": {
-                    "id": 71,
+                    "id": 77,
+                    "output_name": "out1"
+                },
+                "export_type|datasets_26|infile": {
+                    "id": 41,
+                    "output_name": "output_file"
+                },
+                "export_type|datasets_26|name": {
+                    "id": 74,
+                    "output_name": "out1"
+                },
+                "export_type|datasets_27|infile": {
+                    "id": 42,
+                    "output_name": "output_file"
+                },
+                "export_type|datasets_27|name": {
+                    "id": 75,
                     "output_name": "out1"
                 },
                 "export_type|datasets_2|infile": {
@@ -5046,7 +5318,7 @@
                     "output_name": "output"
                 },
                 "export_type|datasets_2|name": {
-                    "id": 52,
+                    "id": 56,
                     "output_name": "out1"
                 },
                 "export_type|datasets_3|infile": {
@@ -5054,7 +5326,7 @@
                     "output_name": "output"
                 },
                 "export_type|datasets_3|name": {
-                    "id": 49,
+                    "id": 53,
                     "output_name": "out1"
                 },
                 "export_type|datasets_4|infile": {
@@ -5062,7 +5334,7 @@
                     "output_name": "output"
                 },
                 "export_type|datasets_4|name": {
-                    "id": 47,
+                    "id": 51,
                     "output_name": "out1"
                 },
                 "export_type|datasets_5|infile": {
@@ -5070,7 +5342,7 @@
                     "output_name": "output"
                 },
                 "export_type|datasets_5|name": {
-                    "id": 46,
+                    "id": 50,
                     "output_name": "out1"
                 },
                 "export_type|datasets_6|infile": {
@@ -5078,7 +5350,7 @@
                     "output_name": "output"
                 },
                 "export_type|datasets_6|name": {
-                    "id": 53,
+                    "id": 57,
                     "output_name": "out1"
                 },
                 "export_type|datasets_7|infile": {
@@ -5086,23 +5358,23 @@
                     "output_name": "output"
                 },
                 "export_type|datasets_7|name": {
-                    "id": 51,
+                    "id": 55,
                     "output_name": "out1"
                 },
                 "export_type|datasets_8|infile": {
-                    "id": 35,
+                    "id": 37,
                     "output_name": "output_file"
                 },
                 "export_type|datasets_8|name": {
-                    "id": 48,
+                    "id": 52,
                     "output_name": "out1"
                 },
                 "export_type|datasets_9|infile": {
-                    "id": 36,
+                    "id": 38,
                     "output_name": "output_file"
                 },
                 "export_type|datasets_9|name": {
-                    "id": 50,
+                    "id": 54,
                     "output_name": "out1"
                 }
             },
@@ -5126,7 +5398,7 @@
             },
             "post_job_actions": {},
             "tool_id": "export_remote",
-            "tool_state": "{\"d_uri\": {\"__class__\": \"RuntimeValue\"}, \"export_type\": {\"export_type_selector\": \"datasets_named\", \"__current_case__\": 2, \"datasets\": [{\"__index__\": 0, \"infile\": {\"__class__\": \"ConnectedValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 1, \"infile\": {\"__class__\": \"ConnectedValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 2, \"infile\": {\"__class__\": \"ConnectedValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 3, \"infile\": {\"__class__\": \"ConnectedValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 4, \"infile\": {\"__class__\": \"ConnectedValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 5, \"infile\": {\"__class__\": \"ConnectedValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 6, \"infile\": {\"__class__\": \"ConnectedValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 7, \"infile\": {\"__class__\": \"ConnectedValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 8, \"infile\": {\"__class__\": \"ConnectedValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 9, \"infile\": {\"__class__\": \"ConnectedValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 10, \"infile\": {\"__class__\": \"ConnectedValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 11, \"infile\": {\"__class__\": \"ConnectedValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 12, \"infile\": {\"__class__\": \"ConnectedValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 13, \"infile\": {\"__class__\": \"ConnectedValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 14, \"infile\": {\"__class__\": \"ConnectedValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 15, \"infile\": {\"__class__\": \"ConnectedValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 16, \"infile\": {\"__class__\": \"ConnectedValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 17, \"infile\": {\"__class__\": \"ConnectedValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 18, \"infile\": {\"__class__\": \"ConnectedValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 19, \"infile\": {\"__class__\": \"ConnectedValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 20, \"infile\": {\"__class__\": \"ConnectedValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 21, \"infile\": {\"__class__\": \"ConnectedValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 22, \"infile\": {\"__class__\": \"ConnectedValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 23, \"infile\": {\"__class__\": \"ConnectedValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 24, \"infile\": {\"__class__\": \"ConnectedValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 25, \"infile\": {\"__class__\": \"ConnectedValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}]}, \"include_metadata_files\": true, \"invalid_chars\": \"\", \"__page__\": null, \"__rerun_remap_job_id__\": null}",
+            "tool_state": "{\"d_uri\": {\"__class__\": \"RuntimeValue\"}, \"export_type\": {\"export_type_selector\": \"datasets_named\", \"__current_case__\": 2, \"datasets\": [{\"__index__\": 0, \"infile\": {\"__class__\": \"RuntimeValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 1, \"infile\": {\"__class__\": \"RuntimeValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 2, \"infile\": {\"__class__\": \"RuntimeValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 3, \"infile\": {\"__class__\": \"RuntimeValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 4, \"infile\": {\"__class__\": \"RuntimeValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 5, \"infile\": {\"__class__\": \"RuntimeValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 6, \"infile\": {\"__class__\": \"RuntimeValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 7, \"infile\": {\"__class__\": \"RuntimeValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 8, \"infile\": {\"__class__\": \"RuntimeValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 9, \"infile\": {\"__class__\": \"RuntimeValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 10, \"infile\": {\"__class__\": \"RuntimeValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 11, \"infile\": {\"__class__\": \"RuntimeValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 12, \"infile\": {\"__class__\": \"RuntimeValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 13, \"infile\": {\"__class__\": \"RuntimeValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 14, \"infile\": {\"__class__\": \"RuntimeValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 15, \"infile\": {\"__class__\": \"RuntimeValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 16, \"infile\": {\"__class__\": \"RuntimeValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 17, \"infile\": {\"__class__\": \"RuntimeValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 18, \"infile\": {\"__class__\": \"RuntimeValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 19, \"infile\": {\"__class__\": \"RuntimeValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 20, \"infile\": {\"__class__\": \"RuntimeValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 21, \"infile\": {\"__class__\": \"RuntimeValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 22, \"infile\": {\"__class__\": \"RuntimeValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 23, \"infile\": {\"__class__\": \"RuntimeValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 24, \"infile\": {\"__class__\": \"RuntimeValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 25, \"infile\": {\"__class__\": \"RuntimeValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 26, \"infile\": {\"__class__\": \"RuntimeValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}, {\"__index__\": 27, \"infile\": {\"__class__\": \"RuntimeValue\"}, \"name\": {\"__class__\": \"ConnectedValue\"}}]}, \"include_metadata_files\": true, \"invalid_chars\": \"\", \"__page__\": null, \"__rerun_remap_job_id__\": null}",
             "tool_version": "0.1.0",
             "type": "tool",
             "uuid": "e3e9e3b7-8492-4ade-b83a-e8e797be0c68",
@@ -5141,6 +5413,6 @@
         }
     },
     "tags": [],
-    "uuid": "23011ec2-726c-415a-8307-76463fc849c6",
-    "version": 9
+    "uuid": "126a3fdb-ed18-4158-8b5c-72935a2217e2",
+    "version": 10
 }
\ No newline at end of file