diff --git a/workflows/VGP-assembly-v2/Purge-duplicates-one-haplotype-VGP6b/Purging-duplicates-one-haplotype-VGP6b-tests.yml b/workflows/VGP-assembly-v2/Purge-duplicates-one-haplotype-VGP6b/Purging-duplicates-one-haplotype-VGP6b-tests.yml index c5d76d461..5c1a8c257 100644 --- a/workflows/VGP-assembly-v2/Purge-duplicates-one-haplotype-VGP6b/Purging-duplicates-one-haplotype-VGP6b-tests.yml +++ b/workflows/VGP-assembly-v2/Purge-duplicates-one-haplotype-VGP6b/Purging-duplicates-one-haplotype-VGP6b-tests.yml @@ -2,23 +2,23 @@ job: Genomescope model parameters: class: File - location: https://www.dropbox.com/scl/fi/6a6b9xc6jih3rtfrfy7ch/Genomescope-model-parameters.tabular?rlkey=2d86kp0wsdlzk5bxzvs36ry4a&dl=1 + location: https://zenodo.org/records/10632760/files/Genomescope%20model%20parameters.tabular?download=1 filetype: tabular Assembly to purge: class: File - location: https://www.dropbox.com/scl/fi/7hbeju59zkbc5d28lpp19/hap1.fasta?rlkey=xii6j4iq0y48f5qulu0nti8uu&dl=1 + location: https://zenodo.org/records/10632760/files/hap1.fasta?download=1 filetype: fasta Meryl Database: class: File - location: https://www.dropbox.com/scl/fi/gpkhbn9onssi5z776kwzy/Meryl-Database.meryldb?rlkey=2ozjdiego6ew9nwaxjgmw3a79&dl=1 + location: https://zenodo.org/records/10632760/files/Meryl%20Database.meryldb?download=1 filetype: meryldb Estimated genome size - Parameter File: class: File - location: https://www.dropbox.com/scl/fi/s1jieqs34p5ol3xjcez39/Estimated-genome-size-Parameter-File.expression.json?rlkey=bamnfmxo7mqk7y3gq59v5rrzb&dl=1 + location: https://zenodo.org/records/10632760/files/Estimated%20genome%20size%20-%20Parameter%20File.expression.json?download=1 filetype: expression.json Assembly to leave alone (need this for merqury): class: File - location: https://www.dropbox.com/scl/fi/xz7v21ora7n86iisopr8i/hap2.fasta?rlkey=91vdm0bes0a77kaz17rwv759y&dl=1 + location: https://zenodo.org/records/10632760/files/hap2.fasta?download=1 filetype: fasta Pacbio Reads Collection - Trimmed: class: Collection @@ -26,7 +26,7 @@ elements: - class: File identifier: yeast_reads_sub1.fastq.gz - location: https://www.dropbox.com/scl/fi/1xmp7kajhdp5cnm4nc8qj/Trimmed_yeast_reads_sub1.fastq.gz?rlkey=q7e54x26fm6fp732kp2lz6bxf&dl=1 + location: https://zenodo.org/records/10632760/files/Trimmed_yeast_reads_sub1.fastq.gz?download=1 Name of un-altered assembly: Hap2 Name of purged assembly: Hap1 outputs: