From 0e6c447ef755a8b93ee241b6cbd4b9b924343ad2 Mon Sep 17 00:00:00 2001 From: Lucille Delisle Date: Thu, 14 Sep 2023 22:22:05 +0200 Subject: [PATCH] fix tests --- workflows/transcriptomics/rnaseq-pe/rnaseq-pe-tests.yml | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/workflows/transcriptomics/rnaseq-pe/rnaseq-pe-tests.yml b/workflows/transcriptomics/rnaseq-pe/rnaseq-pe-tests.yml index a4dc67444..3e43a8bb9 100644 --- a/workflows/transcriptomics/rnaseq-pe/rnaseq-pe-tests.yml +++ b/workflows/transcriptomics/rnaseq-pe/rnaseq-pe-tests.yml @@ -49,7 +49,7 @@ cutadapt: asserts: has_text: - text: "GSM461177_2 4.0 1057657 25033 25779 25250 1032407 78266618 3650637 73538382 6.041191149974054" + text: "GSM461177_2 4.4 1057657 25033 25779 25250 1032407 78266618 3650637 73538382 6.041191149974054" general_stats: asserts: has_text: @@ -60,8 +60,8 @@ n: 4 star: asserts: - has_text: - text: "GSM461177 1032407.0 71.0 854812.0 82.8 70.65 102763.0 102412.0 102040.0 679.0 20.0 24.0 0.54 0.0 1.56 0.0 1.43 82072.0 7.95 32881.0 3.18 0.0 5.9 0.17 0 60888 1754" + has_text_matching: + expression: "GSM461177 1032407.0 71.0 854812.0 82.8 70.65 10276[23].0 102412.0 1020[34][0-9].0 679.0 20.0 24.0 0.54 0.0 1.56 0.0 1.43 82072.0 7.95 32881.0 3.18 0.0 5.9 0.17 0 60888 1754" MultiQC webpage: asserts: - that: "has_text" @@ -105,4 +105,4 @@ GSM461177: asserts: has_text: - text: "FBgn0031217 CG11377 chr2L + 102380 104142 1.003790 31.826454 55.206604" + text: "FBgn0031217\tCG11377\tchr2L\t+\t102380\t104142\t1.955939\t32.891647\t57.313370"