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Fix WDL comments
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stxue1 committed Oct 25, 2024
1 parent e6c13fc commit ae1e279
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Showing 2 changed files with 1 addition and 4 deletions.
1 change: 0 additions & 1 deletion src/toil/cwl/cwltoil.py
Original file line number Diff line number Diff line change
Expand Up @@ -3570,7 +3570,6 @@ def convert_file(filename: str) -> FileID:
skip_remote=self.skip_remote,
bypass_file_store=self.bypass_file_store,
)
# logger.info("Importing tool-associated files...")
visitSteps(
tool,
functools.partial(
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4 changes: 1 addition & 3 deletions src/toil/wdl/wdltoil.py
Original file line number Diff line number Diff line change
Expand Up @@ -1007,8 +1007,6 @@ def get_file_sizes(
Resolve relative-URI files in the given environment and them then into absolute normalized URIs. Returns a dictionary of WDL file values to a tuple of the normalized URI,
parent directory ID, and size of the file. The size of the file may be None, which means unknown size.
Will set the value of the File to the relative-URI.
:param filenames: list of filenames to evaluate on
:param file_source: Context to search for files with
:param task_path: Dotted WDL name of the user-level code doing the
Expand Down Expand Up @@ -1104,7 +1102,7 @@ def convert_files(
task_path: str,
) -> None:
"""
Resolve relative-URI files in the given environment and import all files.
Resolve relative-URI files in the given environment convert the file values to a new value made from a given mapping.
Will set the value of the File to the relative-URI.
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