Useful commands
- Cellpose training
python -m cellpose\
--train --use_gpu\
--dir "/path/to/the/masks/"\
--pretrained_model cyto2\
--chan 0\ # 0=grayscale, 1=red, 2=green, 3=blue
--chan2 0\
--n_epochs 300\
--learning_rate 0.1\
--img_filter images --mask_filter masks
- Show all running jobs
squeue -u $USER -Su -o '%.10M %8i %20j %4t %5D %20R %3C %7m %11l %11L'
- Download password protected dir from the link
wget -r --http-user=USERNAME --http-passwd='PASSWORD' --accept=gz link
wget -r --http-user=test --http-passwd='TEST' --accept=gz https://...