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I extracted Orthogroups using OrthoFinder. I wanted to classify only clusters that have more than 70% Single-Copy genes among the taxa, so I tried using KinFin.
However, when I use the default 'KinFin', an error occurs.
I tried using 'generate_kinfin_input.py' in the script, but only the following message appears.
Usage:
generate_kinfin_input.py -f
[-o ] [orthofinder] [config]
Here, which file should I use for [orthofinder]?
The text was updated successfully, but these errors were encountered:
Hello.
I extracted Orthogroups using OrthoFinder. I wanted to classify only clusters that have more than 70% Single-Copy genes among the taxa, so I tried using KinFin.
However, when I use the default 'KinFin', an error occurs.
I tried using 'generate_kinfin_input.py' in the script, but only the following message appears.
Usage:
[-o ] [orthofinder] [config]generate_kinfin_input.py -f
Here, which file should I use for [orthofinder]?
The text was updated successfully, but these errors were encountered: