diff --git a/doc/workflows.rst b/doc/workflows.rst index 02a1a52c1..a602202d3 100644 --- a/doc/workflows.rst +++ b/doc/workflows.rst @@ -554,6 +554,15 @@ be absolute because Nextflow does not resolve environment variables like 2 hours to run should be excluded from workflow configurations and manually run using :py:mod:`runscripts.analysis` afterwards. +.. tip:: + If you have access to a different HPC cluster that also uses the SLURM + scheduler, you can use vEcoli on that cluster by simply changing + the ``process.queue`` option in ``runscripts/nextflow/config.template`` + to the correct SLURM queue. If your HPC cluster uses a different scheduler, + you will have to change many options in the ``sherlock`` configuration + profile starting with ``process.executor``. Refer to the Nextflow + `executor documentation`_. + .. _progress: --------