Request for databases for MSA generation

[rakeshr10]

Hi, Nice work! Can you provide links to the databases as well as the MSA generation scripts

Regards
Rakesh

[CongLabCode]

Dear Rakesh,

Thank you for your interests in our work. Currently, we do not have organized MSA generation scripts for users to use but we are making it and plan to release it in the future. For databases, we in fact used SRA and assembled genomes downloaded from NCBI, the total data will be around 100TB. We aligned SRA reads directly to the human protein sequences instead of assembling them. We do not think we can provide download for SRA reads. But you can download them from NCBI following the codes we provided in the supplementary material.