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Cell ontology #8

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chiehyujessie opened this issue Oct 25, 2021 · 1 comment
Open

Cell ontology #8

chiehyujessie opened this issue Oct 25, 2021 · 1 comment

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@chiehyujessie
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chiehyujessie commented Oct 25, 2021

rename the cell identity of the seurat object

@chiehyujessie
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chiehyujessie commented Jan 5, 2022

resources

  1. https://www.lungmap.net/resources/ontologies/
    specific for lung
  2. https://www.ebi.ac.uk/ols/ontologies/cl
    cell_ontology20211207.owl was downloaded from here

3.https://obofoundry.org/ontology/cl.html

4.https://bioportal.bioontology.org/ontologies/CL
Cell_ontology_all_cells.csv was downloaded from here and filtered (filter out the rows with genes and proteins, etc.)

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