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Correct overview of lesson 2: no loops but combining commads through …
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…redirection operators
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JorgeBCh committed Feb 9, 2024
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Expand Up @@ -38,7 +38,7 @@ The course will take place over three weeks and will combine live coding and tea
| Lesson | Overview |
| -------------------------- | ---------|
| [Files and Directories](https://cloud-span.github.io/nerc-metagenomics01-file-directories/) |Learn about files and directories, log onto a cloud instance and get a basic introduction to the shell.|
| [Using the Command Line](https://cloud-span.github.io/nerc-metagenomics02-command-line/) |Learn more about using the shell to navigate directories, manipulate and search files and use basic loops to iterate commands.|
| [Using the Command Line](https://cloud-span.github.io/nerc-metagenomics02-command-line/) |Learn more about using the shell to navigate directories, manipulate and search files, and combine existing commands to do new things.|
| [QC & Assembly](https://cloud-span.github.io/nerc-metagenomics03-qc-assembly/) | How to quality control and assemble a genome.|
| [Polishing](https://cloud-span.github.io/nerc-metagenomics04-polishing/) | How to use short reads to polish your metagenome assembly |
| [Binning & Functional Annotation](https://cloud-span.github.io/nerc-metagenomics05-binning/)| How to separate an assembly into MAGs and add functional annotation to these MAGs. |
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