create_plot_withSearch.pbs

#!/bin/bash
#PBS -q condo05
#PBS -l select=1:ncpus=32:mem=250GB
#PBS -l walltime=168:00:00
#PBS -W group_list=x-ccast-prj-hulke
#PBS -N TidkCreatePlotFun


source /mmfs1/home/senta.kryzer/miniconda3/bin/activate tidk_env

cd /mmfs1/projects/brent.hulke/MutagenesisSmart/HudsonAlpha/HifiOmniCAssembly/tidk_telomere_check

tidk plot --csv tidk_search_telomeric_repeat_windows.csv --output plot_telomere_search --height 120 --width 800