diff --git a/.github/workflows/tests.yml b/.github/workflows/tests.yml index b32b175..5732e12 100644 --- a/.github/workflows/tests.yml +++ b/.github/workflows/tests.yml @@ -15,7 +15,7 @@ jobs: strategy: fail-fast: false matrix: - python-version: ["3.8", "3.9", "3.10", "3.11"] + python-version: ["3.8", "3.9", "3.10", "3.11", "3.12"] steps: - uses: actions/checkout@v4 diff --git a/README.md b/README.md index 341ba5b..5752f5d 100644 --- a/README.md +++ b/README.md @@ -1,12 +1,12 @@ -[![PyPI - Python Version](https://img.shields.io/pypi/pyversions/brats?logo=python&color=2EC553)](https://pypi.org/project/brats/) -[![Documentation Status](https://readthedocs.org/projects/brats/badge/?version=latest&color=2EC553)](http://brats.readthedocs.io/?badge=latest) +# BraTS + +[![Python Versions](https://img.shields.io/pypi/pyversions/brats)](https://pypi.org/project/brats/) +[![Stable Version](https://img.shields.io/pypi/v/brats?label=stable)](https://pypi.python.org/pypi/brats/) +[![Documentation Status](https://readthedocs.org/projects/brats/badge/?version=latest)](http://brats.readthedocs.io/?badge=latest) [![tests](https://github.com/BrainLesion/brats/actions/workflows/tests.yml/badge.svg)](https://github.com/BrainLesion/brats/actions/workflows/tests.yml) -[![PyPI version brats-algorithms](https://img.shields.io/pypi/v/brats?color=2EC553)](https://pypi.python.org/pypi/brats/) [![codecov](https://codecov.io/gh/BrainLesion/BraTS/graph/badge.svg?token=A7FWUKO9Y4)](https://codecov.io/gh/BrainLesion/BraTS) [![License](https://img.shields.io/badge/License-Apache%202.0-blue.svg)](https://opensource.org/licenses/Apache-2.0) -# BraTS - Providing the top performing algorithms from the Brain Tumor Segmentation (BraTS) challenges, through an easy to use Python API powered by docker. ## Features @@ -19,16 +19,19 @@ Providing the top performing algorithms from the Brain Tumor Segmentation (BraTS With a Python 3.8+ environment, you can install `brats` directly from [PyPI](https://pypi.org/project/brats/): -```sh +```bash pip install brats ``` -### Docker and NVIDIA Container Toolkit Setup +> [!IMPORTANT] +> To run `brats` you require a Docker installation.
+> Many algorithms also require GPU support (NVIDIA Docker).
+> In case you do not have access to a Cuda-capable GPU, the overview tables in the [Algorithms](#algorithms) section indicate which algorithms are CPU compatible. + -To run `brats` you need a working Docker installation. -Most algorithms also require GPU support (NVIDIA Docker). -Installation instructions: + +### Docker and NVIDIA Container Toolkit Setup - **Docker**: Installation instructions on the official [website](https://docs.docker.com/get-docker/) - **NVIDIA Container Toolkit**: Refer to the [NVIDIA install guide](https://docs.nvidia.com/datacenter/cloud-native/container-toolkit/latest/install-guide.html) and the official [GitHub page](https://github.com/NVIDIA/nvidia-container-toolkit) @@ -61,14 +64,13 @@ For more examples and details please refer to our extensive Notebook tutorials h Adult Glioma Segmentation
-**Class:** `brats.AdultGliomaSegmenter` ([Docs](https://brats.readthedocs.io/en/latest/algorithms.html#brats.core.segmentation_algorithms.AdultGliomaSegmenter)) - +**Class:** `brats.AdultGliomaSegmenter` ([Docs](https://brats.readthedocs.io/en/latest/core/segmentation_algorithms.html#brats.core.segmentation_algorithms.AdultGliomaSegmenter)) -| Year | Rank | Author | Paper | CPU Support | [Key Enum](https://brats.readthedocs.io/en/latest/constants.html#brats.utils.constants.AdultGliomaAlgorithms)| -|------|-------|--------|-------|-------------|-------------| -| 2023 | 1st | _André Ferreira, et al._ | [Link](https://arxiv.org/abs/2402.17317v1) | ❌ | [BraTS23_1](https://brats.readthedocs.io/en/latest/constants.html#brats.utils.constants.AdultGliomaAlgorithms.BraTS23_1) | -| 2023 | 2nd | _Andriy Myronenko, et al._ | N/A | ❌ | [BraTS23_2](https://brats.readthedocs.io/en/latest/constants.html#brats.utils.constants.AdultGliomaAlgorithms.BraTS23_2) | -| 2023 | 3rd | _Fadillah Adamsyah Maani, et al._ | N/A | ❌ | [BraTS23_3](https://brats.readthedocs.io/en/latest/constants.html#brats.utils.constants.AdultGliomaAlgorithms.BraTS23_3) | +| Year | Rank | Author | Paper | CPU Support | Key Enum | +| ---- | ---- | --------------------------------- | ------------------------------------------ | ----------- | ------------------------------------------------------------------------------------------------------------------------ | +| 2023 | 1st | _André Ferreira, et al._ | [Link](https://arxiv.org/abs/2402.17317v1) | ❌ | [BraTS23_1](https://brats.readthedocs.io/en/latest/utils.html#brats.utils.constants.AdultGliomaAlgorithms.BraTS23_1) | +| 2023 | 2nd | _Andriy Myronenko, et al._ | N/A | ❌ | [BraTS23_2](https://brats.readthedocs.io/en/latest/utils.html#brats.utils.constants.AdultGliomaAlgorithms.BraTS23_2) | +| 2023 | 3rd | _Fadillah Adamsyah Maani, et al._ | N/A | ❌ | [BraTS23_3](https://brats.readthedocs.io/en/latest/utils.html#brats.utils.constants.AdultGliomaAlgorithms.BraTS23_3) | @@ -76,13 +78,13 @@ For more examples and details please refer to our extensive Notebook tutorials h BraTS-Africa Segmentation
-**Class:** `brats.AfricaSegmenter` ([Docs](https://brats.readthedocs.io/en/latest/algorithms.html#brats.core.segmentation_algorithms.AfricaSegmenter)) +**Class:** `brats.AfricaSegmenter` ([Docs](https://brats.readthedocs.io/en/latest/core/segmentation_algorithms.html#brats.core.segmentation_algorithms.AfricaSegmenter)) -| Year | Rank | Author | Paper | CPU Support | [Key Enum](https://brats.readthedocs.io/en/latest/constants.html#brats.utils.constants.AfricaAlgorithms)| -|------|-------|--------|-------|-------------|-------------| -| 2023 | 1st | _Andriy Myronenko, et al._ | TODO | ❌ | [BraTS23_1](https://brats.readthedocs.io/en/latest/constants.html#brats.utils.constants.AfricaAlgorithms.BraTS23_1) | -| 2023 | 2nd | _Alyssa R Amod, et al._ | N/A | ❌ | [BraTS23_2](https://brats.readthedocs.io/en/latest/constants.html#brats.utils.constants.AfricaAlgorithms.BraTS23_2) | -| 2023 | 3rd | _Ziyan Huang, et al._ | N/A | ✅ | [BraTS23_3](https://brats.readthedocs.io/en/latest/constants.html#brats.utils.constants.AfricaAlgorithms.BraTS23_3) | +| Year | Rank | Author | Paper | CPU Support | Key Enum | +| ---- | ---- | -------------------------- | ----- | ----------- | ------------------------------------------------------------------------------------------------------------------- | +| 2023 | 1st | _Andriy Myronenko, et al._ | TODO | ❌ | [BraTS23_1](https://brats.readthedocs.io/en/latest/utils.html#brats.utils.constants.AfricaAlgorithms.BraTS23_1) | +| 2023 | 2nd | _Alyssa R Amod, et al._ | N/A | ❌ | [BraTS23_2](https://brats.readthedocs.io/en/latest/utils.html#brats.utils.constants.AfricaAlgorithms.BraTS23_2) | +| 2023 | 3rd | _Ziyan Huang, et al._ | N/A | ✅ | [BraTS23_3](https://brats.readthedocs.io/en/latest/utils.html#brats.utils.constants.AfricaAlgorithms.BraTS23_3) | @@ -90,14 +92,13 @@ For more examples and details please refer to our extensive Notebook tutorials h Meningioma Segmentation
-**Class:** `brats.MeningiomaSegmenter` ([Docs](https://brats.readthedocs.io/en/latest/algorithms.html#brats.core.segmentation_algorithms.MeningiomaSegmenter)) - +**Class:** `brats.MeningiomaSegmenter` ([Docs](https://brats.readthedocs.io/en/latest/core/segmentation_algorithms.html#brats.core.segmentation_algorithms.MeningiomaSegmenter)) -| Year | Rank | Author | Paper | CPU Support | [Key Enum](https://brats.readthedocs.io/en/latest/constants.html#brats.utils.constants.MeningiomaAlgorithms)| -|------|-------|--------|-------|-------------|-------------| -| 2023 | 1st | _Andriy Myronenko, et al._ | N/A | ❌ | [BraTS23_1](https://brats.readthedocs.io/en/latest/constants.html#brats.utils.constants.MeningiomaAlgorithms.BraTS23_1) | -| 2023 | 2nd | _Ziyan Huang, et al._ | N/A | ✅ | [BraTS23_2](https://brats.readthedocs.io/en/latest/constants.html#brats.utils.constants.MeningiomaAlgorithms.BraTS23_2) | -| 2023 | 3rd | _Zhifan Jiang et al._ | N/A | ❌ | [BraTS23_3](https://brats.readthedocs.io/en/latest/constants.html#brats.utils.constants.MeningiomaAlgorithms.BraTS23_3) | +| Year | Rank | Author | Paper | CPU Support | Key Enum | +| ---- | ---- | -------------------------- | ----- | ----------- | ----------------------------------------------------------------------------------------------------------------------- | +| 2023 | 1st | _Andriy Myronenko, et al._ | N/A | ❌ | [BraTS23_1](https://brats.readthedocs.io/en/latest/utils.html#brats.utils.constants.MeningiomaAlgorithms.BraTS23_1) | +| 2023 | 2nd | _Ziyan Huang, et al._ | N/A | ✅ | [BraTS23_2](https://brats.readthedocs.io/en/latest/utils.html#brats.utils.constants.MeningiomaAlgorithms.BraTS23_2) | +| 2023 | 3rd | _Zhifan Jiang et al._ | N/A | ❌ | [BraTS23_3](https://brats.readthedocs.io/en/latest/utils.html#brats.utils.constants.MeningiomaAlgorithms.BraTS23_3) | @@ -105,13 +106,13 @@ For more examples and details please refer to our extensive Notebook tutorials h Brain Metastases Segmentation
-**Class:** `brats.MetastasesSegmenter` ([Docs](https://brats.readthedocs.io/en/latest/algorithms.html#brats.core.segmentation_algorithms.MetastasesSegmenter)) +**Class:** `brats.MetastasesSegmenter` ([Docs](https://brats.readthedocs.io/en/latest/core/segmentation_algorithms.html#brats.core.segmentation_algorithms.MetastasesSegmenter)) -| Year | Rank | Author | Paper | CPU Support | [Key Enum](https://brats.readthedocs.io/en/latest/constants.html#brats.utils.constants.MetastasesAlgorithms)| -|------|-------|--------|-------|-------------|-------------| -| 2023 | 1st | _Andriy Myronenko, et al._ | N/A | ❌ | [BraTS23_1](https://brats.readthedocs.io/en/latest/constants.html#brats.utils.constants.MetastasesAlgorithms.BraTS23_1) | -| 2023 | 2nd | _Siwei Yang, et al._ | N/A | ❌ | [BraTS23_2](https://brats.readthedocs.io/en/latest/constants.html#brats.utils.constants.MetastasesAlgorithms.BraTS23_2) | -| 2023 | 3rd | _Ziyan Huang, et al._ | N/A | ✅ | [BraTS23_3](https://brats.readthedocs.io/en/latest/constants.html#brats.utils.constants.MetastasesAlgorithms.BraTS23_3) | +| Year | Rank | Author | Paper | CPU Support | Key Enum | +| ---- | ---- | -------------------------- | ----- | ----------- | ----------------------------------------------------------------------------------------------------------------------- | +| 2023 | 1st | _Andriy Myronenko, et al._ | N/A | ❌ | [BraTS23_1](https://brats.readthedocs.io/en/latest/utils.html#brats.utils.constants.MetastasesAlgorithms.BraTS23_1) | +| 2023 | 2nd | _Siwei Yang, et al._ | N/A | ❌ | [BraTS23_2](https://brats.readthedocs.io/en/latest/utils.html#brats.utils.constants.MetastasesAlgorithms.BraTS23_2) | +| 2023 | 3rd | _Ziyan Huang, et al._ | N/A | ✅ | [BraTS23_3](https://brats.readthedocs.io/en/latest/utils.html#brats.utils.constants.MetastasesAlgorithms.BraTS23_3) | @@ -119,14 +120,13 @@ For more examples and details please refer to our extensive Notebook tutorials h Pediatric Segmentation
-**Class:** `brats.PediatricSegmenter` ([Docs](https://brats.readthedocs.io/en/latest/algorithms.html#brats.core.segmentation_algorithms.PediatricSegmenter)) +**Class:** `brats.PediatricSegmenter` ([Docs](https://brats.readthedocs.io/en/latest/core/segmentation_algorithms.html#brats.core.segmentation_algorithms.PediatricSegmenter)) - -| Year | Rank | Author | Paper | CPU Support | [Key Enum](https://brats.readthedocs.io/en/latest/constants.html#brats.utils.constants.PediatricAlgorithms)| -|------|-------|--------|-------|-------------|-------------| -| 2023 | 1st | _Zhifan Jiang et al._ | N/A | ❌ | [BraTS23_1](https://brats.readthedocs.io/en/latest/constants.html#brats.utils.constants.PediatricAlgorithms.BraTS23_1) | -| 2023 | 2nd | _Andriy Myronenko, et al._ | N/A | ❌ | [BraTS23_2](https://brats.readthedocs.io/en/latest/constants.html#brats.utils.constants.PediatricAlgorithms.BraTS23_2) | -| 2023 | 3rd | _Yubo Zhou_ | N/A | ❌ | [BraTS23_3](https://brats.readthedocs.io/en/latest/constants.html#brats.utils.constants.PediatricAlgorithms.BraTS23_3) | +| Year | Rank | Author | Paper | CPU Support | Key Enum | +| ---- | ---- | -------------------------- | ----- | ----------- | ---------------------------------------------------------------------------------------------------------------------- | +| 2023 | 1st | _Zhifan Jiang et al._ | N/A | ❌ | [BraTS23_1](https://brats.readthedocs.io/en/latest/utils.html#brats.utils.constants.PediatricAlgorithms.BraTS23_1) | +| 2023 | 2nd | _Andriy Myronenko, et al._ | N/A | ❌ | [BraTS23_2](https://brats.readthedocs.io/en/latest/utils.html#brats.utils.constants.PediatricAlgorithms.BraTS23_2) | +| 2023 | 3rd | _Yubo Zhou_ | N/A | ❌ | [BraTS23_3](https://brats.readthedocs.io/en/latest/utils.html#brats.utils.constants.PediatricAlgorithms.BraTS23_3) | @@ -136,18 +136,16 @@ For more examples and details please refer to our extensive Notebook tutorials h Inpainting
-**Class:** `brats.Inpainter` ([Docs](https://brats.readthedocs.io/en/latest/algorithms.html#brats.core.inpainting_algorithms.Inpainter)) - -| Year | Rank | Author | Paper | CPU Support | [Key Enum](https://brats.readthedocs.io/en/latest/constants.html#brats.utils.constants.InpaintingAlgorithms) | -|------|-------|--------|-------|-------------|-------------| -| 2023 | 1st | _Juexin Zhang, et al._ | N/A | ✅ | [BraTS23_1](https://brats.readthedocs.io/en/latest/constants.html#brats.utils.constants.InpaintingAlgorithms.BraTS23_1) | -| 2023 | 2nd | _Alicia Durrer, et al._ | N/A | ❌ | [BraTS23_2](https://brats.readthedocs.io/en/latest/constants.html#brats.utils.constants.InpaintingAlgorithms.BraTS23_2) | -| 2023 | 3rd | _Jiayu Huo, et al._ | N/A | ✅ | [BraTS23_3](https://brats.readthedocs.io/en/latest/constants.html#brats.utils.constants.InpaintingAlgorithms.BraTS23_3) | +**Class:** `brats.Inpainter` ([Docs](https://brats.readthedocs.io/en/latest/core/inpainting_algorithms.html#brats.core.inpainting_algorithms.Inpainter)) +| Year | Rank | Author | Paper | CPU Support | Key Enum | +| ---- | ---- | ----------------------- | ----- | ----------- | ----------------------------------------------------------------------------------------------------------------------- | +| 2023 | 1st | _Juexin Zhang, et al._ | N/A | ✅ | [BraTS23_1](https://brats.readthedocs.io/en/latest/utils.html#brats.utils.constants.InpaintingAlgorithms.BraTS23_1) | +| 2023 | 2nd | _Alicia Durrer, et al._ | N/A | ❌ | [BraTS23_2](https://brats.readthedocs.io/en/latest/utils.html#brats.utils.constants.InpaintingAlgorithms.BraTS23_2) | +| 2023 | 3rd | _Jiayu Huo, et al._ | N/A | ✅ | [BraTS23_3](https://brats.readthedocs.io/en/latest/utils.html#brats.utils.constants.InpaintingAlgorithms.BraTS23_3) | - ## Citation If you use BraTS in your research, please cite it to support the development! diff --git a/docs/source/algorithms.rst b/docs/source/algorithms.rst deleted file mode 100644 index 6a72be6..0000000 --- a/docs/source/algorithms.rst +++ /dev/null @@ -1,31 +0,0 @@ -Algorithms -======================== - -The following classes provide the top performing algorithms from several BraTS challenges. -All algorithms can be used for a single subject inference (one set of MRI scans) or for a batch of multiple subjects with the respective methods inherited from the base class (BraTSAlgorithm). - - -Segmentation Algorithms --------------------------------------- - - -.. automodule:: brats.core.segmentation_algorithms - - -Inpainting Algorithms --------------------------------------- - - -.. automodule:: brats.core.inpainting_algorithms - - - - -Abstract Base Class --------------------------------------- - -.. automodule:: brats.core.brats_algorithm - - - - diff --git a/docs/source/conf.py b/docs/source/conf.py index 073b601..907cbaf 100644 --- a/docs/source/conf.py +++ b/docs/source/conf.py @@ -5,9 +5,14 @@ import os import sys +from subprocess import run + sys.path.insert(0, os.path.abspath("../../")) + +run(["python", "preprocess_readme.py"]) + # -- Project information ----------------------------------------------------- # https://www.sphinx-doc.org/en/master/usage/configuration.html#project-information @@ -33,8 +38,8 @@ # -- Options for HTML output ------------------------------------------------- # https://www.sphinx-doc.org/en/master/usage/configuration.html#options-for-html-output -html_theme = "sphinx_rtd_theme" -html_static_path = ["_static"] +html_theme = "furo" +# html_static_path = ["_static"] autodoc_default_options = { "members": True, diff --git a/docs/source/core/brats_algorithm.rst b/docs/source/core/brats_algorithm.rst new file mode 100644 index 0000000..9d68ac0 --- /dev/null +++ b/docs/source/core/brats_algorithm.rst @@ -0,0 +1,6 @@ +Abstract Base Class +==================== + +The following class represents the abstract base class for BraTS algorithms. + +.. automodule:: brats.core.brats_algorithm diff --git a/docs/source/core/core.rst b/docs/source/core/core.rst new file mode 100644 index 0000000..3e9baa3 --- /dev/null +++ b/docs/source/core/core.rst @@ -0,0 +1,13 @@ +Core +======================== + +The following classes provide the top performing algorithms from several BraTS challenges. +All algorithms can be used for a single subject inference (one set of MRI scans) or for a batch of multiple subjects. + +.. toctree:: + :maxdepth: 2 + :caption: Core Algorithms + + segmentation_algorithms + inpainting_algorithms + brats_algorithm diff --git a/docs/source/core/inpainting_algorithms.rst b/docs/source/core/inpainting_algorithms.rst new file mode 100644 index 0000000..6b89793 --- /dev/null +++ b/docs/source/core/inpainting_algorithms.rst @@ -0,0 +1,6 @@ +Inpainting Algorithms +====================== + +The following classes provide inpainting algorithms from several BraTS challenges. + +.. automodule:: brats.core.inpainting_algorithms diff --git a/docs/source/core/segmentation_algorithms.rst b/docs/source/core/segmentation_algorithms.rst new file mode 100644 index 0000000..dc047e3 --- /dev/null +++ b/docs/source/core/segmentation_algorithms.rst @@ -0,0 +1,6 @@ +Segmentation Algorithms +======================== + +The following classes provide segmentation algorithms from several BraTS challenges. + +.. automodule:: brats.core.segmentation_algorithms diff --git a/docs/source/index.rst b/docs/source/index.rst index ae7ba0f..740182c 100644 --- a/docs/source/index.rst +++ b/docs/source/index.rst @@ -6,26 +6,25 @@ BraTS documentation =================== -.. include:: ../../README.md +.. include:: ../README_preprocessed.md :parser: myst_parser.sphinx_ -.. toctree:: - :maxdepth: 4 - :caption: Contents: +Sections +=================== -Indices and tables -=================== -* :ref:`genindex` -* :ref:`modindex` -* :ref:`search` +.. toctree:: + :maxdepth: 1 + :caption: Getting Started: + + readme .. toctree:: :maxdepth: 2 - :caption: Contents: + :caption: API Reference: - algorithms - constants + core/core + utils/utils diff --git a/docs/source/preprocess_readme.py b/docs/source/preprocess_readme.py new file mode 100644 index 0000000..da5cdb4 --- /dev/null +++ b/docs/source/preprocess_readme.py @@ -0,0 +1,36 @@ +import re + + +def preprocess_readme(input_file: str, output_file: str) -> None: + """Preprocess a README file to replace GitHub admonitions with Sphinx-style admonitions. + + Args: + input_file (str): original README file + output_file (str): processed README file + + """ + with open(input_file, "r") as file: + content = file.read() + + admonition_types = ["IMPORTANT", "NOTE", "TIP", "WARNING", "CAUTION"] + + for ad_type in admonition_types: + # Replace > [!ad_type] with Sphinx admonition syntax + content = re.sub( + r"> \[!" + + ad_type + + "\]\s*\n((?:> .*\n)*)", # Match the > [!ad_type] and subsequent lines + lambda m: "```{" + + ad_type + + "}\n" + + m.group(1).replace("> ", "").strip() + + "\n```", # Replace with MyST syntax + content, + ) + # Write the transformed content to the output file + with open(output_file, "w") as file: + file.write(content) + + +if __name__ == "__main__": + preprocess_readme("../../README.md", "../README_preprocessed.md") diff --git a/docs/source/readme.rst b/docs/source/readme.rst new file mode 100644 index 0000000..bf35448 --- /dev/null +++ b/docs/source/readme.rst @@ -0,0 +1,6 @@ +Readme +============== + + +.. include:: ../README_preprocessed.md + :parser: myst_parser.sphinx_ \ No newline at end of file diff --git a/docs/source/constants.rst b/docs/source/utils/utils.rst similarity index 53% rename from docs/source/constants.rst rename to docs/source/utils/utils.rst index 9daaa5f..11a898e 100644 --- a/docs/source/constants.rst +++ b/docs/source/utils/utils.rst @@ -1,8 +1,15 @@ -Constants +Utils ======================== -Constants used in the package +Constants ------------------------------ .. automodule:: brats.utils.constants + :members: + + +Exceptions +------------------------------ + +.. automodule:: brats.utils.exceptions :members: \ No newline at end of file diff --git a/pyproject.toml b/pyproject.toml index b47eb98..ebb4d8e 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -14,7 +14,7 @@ authors = [ "Florian Kofler ", ] -license = "AGPL-3.0" +license = "Apache-2.0" readme = "README.md" repository = "https://github.com/BrainLesion/BraTS" homepage = "https://github.com/BrainLesion/BraTS" @@ -27,14 +27,14 @@ keywords = [ "brain lesion", "segmentation", "synthesis", - "inpainting" + "inpainting", ] # Add the exclude field directly under [tool.poetry] exclude = [ - "tests", # Test files - "docs", # Documentation files - ".github", # GitHub workflows, actions, etc. + "tests", # Test files + "docs", # Documentation files + ".github", # GitHub workflows, actions, etc. ] [tool.poetry.dependencies] @@ -54,7 +54,7 @@ pytest-cov = ">=5.0.0" optional = true [tool.poetry.group.docs.dependencies] -Sphinx = ">=7.0.0" +Sphinx = ">=7.0.0" sphinx-copybutton = ">=0.5.2" -sphinx-rtd-theme = ">=1.3.0" -myst-parser = ">=2.0.0" \ No newline at end of file +furo = ">=2024.8.6" +myst-parser = ">=2.0.0"