diff --git a/renv.lock b/renv.lock index 0c96dbf..5bc65e6 100644 --- a/renv.lock +++ b/renv.lock @@ -2,6 +2,26 @@ "R": { "Version": "4.3.2", "Repositories": [ + { + "Name": "BioCsoft", + "URL": "https://bioconductor.org/packages/3.18/bioc" + }, + { + "Name": "BioCann", + "URL": "https://bioconductor.org/packages/3.18/data/annotation" + }, + { + "Name": "BioCexp", + "URL": "https://bioconductor.org/packages/3.18/data/experiment" + }, + { + "Name": "BioCworkflows", + "URL": "https://bioconductor.org/packages/3.18/workflows" + }, + { + "Name": "BioCbooks", + "URL": "https://bioconductor.org/packages/3.18/books" + }, { "Name": "CRAN", "URL": "https://cloud.r-project.org" @@ -83,14 +103,8 @@ }, "FCBF": { "Package": "FCBF", - "Version": "1.99.1", - "Source": "GitHub", - "RemoteType": "github", - "RemoteHost": "api.github.com", - "RemoteUsername": "lubianat", - "RemoteRepo": "FCBF", - "RemoteRef": "master", - "RemoteSha": "51b96006c8655cb4d6e07ea45ea8b25fd415c9f1", + "Version": "2.10.0", + "Source": "Bioconductor", "Requirements": [ "R", "SummarizedExperiment", @@ -101,7 +115,7 @@ "pbapply", "stats" ], - "Hash": "50418748b54c83f0eceab73cb79deb3c" + "Hash": "d9f5837e9cefa059c8ca35a5a081729f" }, "FSelectorRcpp": { "Package": "FSelectorRcpp", @@ -406,23 +420,16 @@ "biogram": { "Package": "biogram", "Version": "1.6.3", - "Source": "GitHub", + "Source": "Repository", "Repository": "CRAN", - "RemoteType": "github", - "RemoteHost": "api.github.com", - "RemoteRepo": "biogram", - "RemoteUsername": "michbur", - "RemoteRef": "HEAD", - "RemoteSha": "1e8612de57dae53191e8ab8c86bbee679a47ff9a", "Requirements": [ - "Matrix", "R", "combinat", "entropy", "partitions", "slam" ], - "Hash": "01227f7b8700c12f5b88c33539a3f5e8" + "Hash": "16ad11ab1148293d81ef7ab4038880aa" }, "bitops": { "Package": "bitops", @@ -510,16 +517,6 @@ ], "Hash": "b21916dd77a27642b447374a5d30ecf3" }, - "codetools": { - "Package": "codetools", - "Version": "0.2-19", - "Source": "Repository", - "Repository": "CRAN", - "Requirements": [ - "R" - ], - "Hash": "c089a619a7fae175d149d89164f8c7d8" - }, "colorspace": { "Package": "colorspace", "Version": "2.1-0", diff --git a/renv/settings.json b/renv/settings.json new file mode 100644 index 0000000..45ee56f --- /dev/null +++ b/renv/settings.json @@ -0,0 +1,19 @@ +{ + "bioconductor.version": "3.18", + "external.libraries": [], + "ignored.packages": [], + "package.dependency.fields": [ + "Imports", + "Depends", + "LinkingTo" + ], + "ppm.enabled": null, + "ppm.ignored.urls": [], + "r.version": null, + "snapshot.type": "implicit", + "use.cache": true, + "vcs.ignore.cellar": true, + "vcs.ignore.library": true, + "vcs.ignore.local": true, + "vcs.manage.ignores": true +}