install.yml

name: Set up Conda environment and run tests

on: [push, pull_request, workflow_dispatch]

jobs:
  build:
    runs-on: ubuntu-latest

    steps:
    - name: Checkout code with submodules
      uses: actions/checkout@v2
      with:
        submodules: recursive  # Ensure submodules are checked out

    - name: Setup Miniconda
      uses: conda-incubator/setup-miniconda@v2
      with:
        activate-environment: ""
        auto-activate-base: true

    - name: Update Conda and Install Dependencies
      shell: bash -l {0}
      run: |
        conda update -y -n base conda
        conda install -y -n base conda-libmamba-solver
        conda install -y anaconda-client -n base
        conda config --set solver libmamba
        conda env create -y auto-mech/amech-deps
        conda activate amech-deps
        conda info
        conda list
    - name: Activate environment, install other dependencies and run pytest on submodules
      shell: bash -l {0}
      continue-on-error: false
      run: |
        conda activate amech-deps
        pip install git+https://github.com/Auto-Mech/autoio.git@dev#subdirectory=autoio-base
        pip install git+https://github.com/Auto-Mech/autoio.git@dev#subdirectory=autoio-interfaces
        pip install .
        pytest