diff --git a/data/data.yaml b/data/data.yaml index 4663197..8a3672d 100644 --- a/data/data.yaml +++ b/data/data.yaml @@ -6922,190 +6922,190 @@ - description: 'LAV to BED: Converts a LAV formatted file to BED format' title: LAV to BED 1.0.0 url: https://usegalaxy.org.au/root?tool_id=lav_to_bed1 - - description: 'OpenBabel converter for molecular formats: ' - title: OpenBabel converter for molecular formats 2.4.1 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_molecules - - description: 'Convert Genomic Intervals To Strict BED: ' - title: Convert Genomic Intervals To Strict BED 1.0.1 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_interval_to_bedstrict_0 + - description: 'Convert Interval to BGZIP: ' + title: Convert Interval to BGZIP 1.0.3 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_interval_to_bgzip_0 + - description: 'Convert FASTA to fai file: ' + title: Convert FASTA to fai file 1.0.1 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_fasta_to_fai - description: 'Convert Len file to Linecount: ' title: Convert Len file to Linecount 1.0.1 url: https://usegalaxy.org.au/root?tool_id=CONVERTER_len_to_linecount - - description: 'Convert Interval to tabix: ' - title: Convert Interval to tabix 1.0.2 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_interval_to_tabix_0 - - description: 'Convert compressed file to uncompressed.: ' - title: Convert compressed file to uncompressed. 1.0.1 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_bz2_to_uncompressed + - description: 'Convert Genomic Intervals To BED: ' + title: Convert Genomic Intervals To BED 1.0.0 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_interval_to_bed_0 + - description: 'SMILES to SMILES: ' + title: SMILES to SMILES 2.4.1 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_smiles_to_smiles + - description: 'Convert Genomic Intervals To Strict BED6: ' + title: Convert Genomic Intervals To Strict BED6 1.0.1 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_interval_to_bed6_0 + - description: 'Convert FASTA to len file: ' + title: Convert FASTA to len file 1.0.1 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_fasta_to_len - description: 'Convert uncompressed file to compressed: ' title: Convert uncompressed file to compressed 1.16+galaxy0 url: https://usegalaxy.org.au/root?tool_id=CONVERTER_uncompressed_to_gz - - description: 'Convert FASTA to 2bit: ' - title: Convert FASTA to 2bit 1.0.1 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_fasta_to_2bit - - description: 'Convert Interval to BGZIP: ' - title: Convert Interval to BGZIP 1.0.3 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_interval_to_bgzip_0 + - description: 'OpenBabel converter for molecular formats: ' + title: OpenBabel converter for molecular formats 2.4.1 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_molecules + - description: 'Convert XTC, DCD, and TRR: ' + title: Convert XTC, DCD, and TRR 1.0.0 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_mdconvert + - description: 'Convert tar to directory: ' + title: Convert tar to directory 1.0.1 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_tar_to_directory + - description: 'Convert GFF to Feature Location Index: ' + title: Convert GFF to Feature Location Index 1.0.0 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_gff_to_fli_0 + - description: 'Convert plink pbed to linkage lped: ' + title: Convert plink pbed to linkage lped 0.02 + url: https://usegalaxy.org.au/root?tool_id=pbed2lpedconvert + - description: 'Convert Wiggle to Interval: ' + title: Convert Wiggle to Interval 1.0.1 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_wiggle_to_interval_0 + - description: 'Convert CML to SMILES: ' + title: Convert CML to SMILES 2.4.1 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_cml_to_smiles + - description: 'Convert MAF to Genomic Intervals: ' + title: Convert MAF to Genomic Intervals 1.0.3 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_maf_to_interval_0 + - description: 'Convert BedGraph to BigWig: ' + title: Convert BedGraph to BigWig 1.0.1 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_bedgraph_to_bigwig - description: 'Convert GFF to BED: ' title: Convert GFF to BED 1.0.1 url: https://usegalaxy.org.au/root?tool_id=CONVERTER_gff_to_bed_0 - description: 'Convert SAM to BigWig: ' title: Convert SAM to BigWig 1.0.3 url: https://usegalaxy.org.au/root?tool_id=CONVERTER_sam_to_bigwig_0 - - description: 'Convert BAM to queryname-sorted BAM: ' - title: Convert BAM to queryname-sorted BAM 1.0.1 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_bam_to_qname_sorted_bam + - description: 'Convert BED to GFF: ' + title: Convert BED to GFF 2.0.1 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_bed_to_gff_0 + - description: 'Convert Genomic Intervals To Strict BED: ' + title: Convert Genomic Intervals To Strict BED 1.0.1 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_interval_to_bedstrict_0 + - description: 'Convert FASTA to 2bit: ' + title: Convert FASTA to 2bit 1.0.1 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_fasta_to_2bit + - description: 'Convert MAF to Fasta: ' + title: Convert MAF to Fasta 1.0.2 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_maf_to_fasta_0 + - description: 'Convert Wiggle to BigWig: ' + title: Convert Wiggle to BigWig 1.0.1 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_wig_to_bigwig + - description: 'Convert SMILES to MOL: ' + title: Convert SMILES to MOL 2.4.1 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_SMILES_to_MOL + - description: 'Convert PDB to GRO: ' + title: Convert PDB to GRO 1.0.0 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_Pdb_to_Gro_0 - description: 'Convert compressed file to uncompressed.: ' title: Convert compressed file to uncompressed. 1.0.0 url: https://usegalaxy.org.au/root?tool_id=CONVERTER_gz_to_uncompressed - - description: 'Convert Wiggle to Interval: ' - title: Convert Wiggle to Interval 1.0.1 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_wiggle_to_interval_0 - - description: 'Convert FASTA to Bowtie base space Index: ' - title: Convert FASTA to Bowtie base space Index 1.3.1 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_fasta_to_bowtie_base_index - - description: 'Convert BED, GFF, or VCF to BigWig: ' - title: Convert BED, GFF, or VCF to BigWig 1.0.1 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_bed_gff_or_vcf_to_bigwig_0 - - description: 'Convert XTC, DCD, and TRR: ' - title: Convert XTC, DCD, and TRR 1.0.0 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_mdconvert - - description: 'Convert FASTA to Tabular: ' - title: Convert FASTA to Tabular 1.0.1 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_fasta_to_tabular + - description: 'Convert lped to plink pbed: ' + title: Convert lped to plink pbed 0.02 + url: https://usegalaxy.org.au/root?tool_id=lped2pbedconvert + - description: 'Convert CRAM to BAM: ' + title: Convert CRAM to BAM 1.0.2 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_cram_to_bam_0 + - description: 'Convert GFF to Interval Index: ' + title: Convert GFF to Interval Index 1.0.1 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_gff_to_interval_index_0 + - description: 'Convert MOL2 to MOL: ' + title: Convert MOL2 to MOL 2.4.1 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_mol2_to_mol + - description: 'Convert BAM to queryname-sorted BAM: ' + title: Convert BAM to queryname-sorted BAM 1.0.1 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_bam_to_qname_sorted_bam + - description: 'Convert BAM to BigWig: ' + title: Convert BAM to BigWig 1.0.2 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_bam_to_bigwig_0 + - description: 'Convert Bam to Bai: ' + title: Convert Bam to Bai 1.0.1 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_Bam_Bai_0 + - description: 'Convert Biom datasets: ' + title: Convert Biom datasets 2.1.5 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_biom + - description: 'Convert BED to Feature Location Index: ' + title: Convert BED to Feature Location Index 1.0.0 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_bed_to_fli_0 - description: 'Convert neostore.zip files to neostore: ' title: Convert neostore.zip files to neostore 1.0.0 url: https://usegalaxy.org.au/root?tool_id=CONVERTER_neostorezip_to_neostore - - description: 'Convert tar to directory: ' - title: Convert tar to directory 1.0.1 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_tar_to_directory + - description: 'Convert BigWig to Wiggle: Convert bigWig to wig' + title: Convert BigWig to Wiggle 377+galaxy0 + url: https://usegalaxy.org.au/root?tool_id=bigwigtowig + - description: 'Convert FASTA to Bowtie color space Index: ' + title: Convert FASTA to Bowtie color space Index 1.2.3 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_fasta_to_bowtie_color_index + - description: 'Convert tabular to dbnsfp: ' + title: Convert tabular to dbnsfp 1.0.2 + url: https://usegalaxy.org.au/root?tool_id=tabular_to_dbnsfp + - description: 'Convert Ref taxonomy to Seq Taxonomy: converts 2 or 3 column sequence + taxonomy file to a 2 column mothur taxonomy_outline format' + title: Convert Ref taxonomy to Seq Taxonomy 1.0.1 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_ref_to_seq_taxomony - description: 'Convert InChI to MOL: ' title: Convert InChI to MOL 2.4.1 url: https://usegalaxy.org.au/root?tool_id=CONVERTER_inchi_to_mol - description: 'Convert FASTQ files to seek locations: ' title: Convert FASTQ files to seek locations 1.0.1 url: https://usegalaxy.org.au/root?tool_id=CONVERTER_fastq_to_fqtoc0 - - description: 'Convert Parquet to csv: ' - title: Convert Parquet to csv 1.0.0 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_parquet_to_csv - description: 'Convert Genomic Intervals To Coverage: ' title: Convert Genomic Intervals To Coverage 1.0.1 url: https://usegalaxy.org.au/root?tool_id=CONVERTER_interval_to_bigwig_0 - - description: 'Convert FASTA to len file: ' - title: Convert FASTA to len file 1.0.1 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_fasta_to_len - - description: 'Convert GFF to Interval Index: ' - title: Convert GFF to Interval Index 1.0.1 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_gff_to_interval_index_0 - - description: 'Convert CML to SMILES: ' - title: Convert CML to SMILES 2.4.1 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_cml_to_smiles - - description: 'Convert FASTA to Bowtie color space Index: ' - title: Convert FASTA to Bowtie color space Index 1.2.3 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_fasta_to_bowtie_color_index - - description: 'Convert BGZ VCF to tabix: ' - title: Convert BGZ VCF to tabix 1.0.2 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_vcf_bgzip_to_tabix_0 - - description: 'Convert Biom datasets: ' - title: Convert Biom datasets 2.1.5 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_biom - - description: 'Convert BAM to BigWig: ' - title: Convert BAM to BigWig 1.0.2 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_bam_to_bigwig_0 - - description: 'Convert tabular to dbnsfp: ' - title: Convert tabular to dbnsfp 1.0.2 - url: https://usegalaxy.org.au/root?tool_id=tabular_to_dbnsfp - - description: 'Convert PDB to GRO: ' - title: Convert PDB to GRO 1.0.0 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_Pdb_to_Gro_0 - - description: 'Convert lped to fped: ' - title: Convert lped to fped 0.02 - url: https://usegalaxy.org.au/root?tool_id=lped2fpedconvert - - description: 'Convert SAM to BAM without sorting: ' - title: Convert SAM to BAM without sorting 1.0.1 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_sam_to_unsorted_bam - - description: 'Convert FASTA to fai file: ' - title: Convert FASTA to fai file 1.0.1 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_fasta_to_fai - - description: 'Convert Genomic Intervals To Strict BED12: ' - title: Convert Genomic Intervals To Strict BED12 1.0.0 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_interval_to_bed12_0 - - description: 'Convert Picard Interval List to BED6: converter' - title: Convert Picard Interval List to BED6 1.0.1 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_picard_interval_list_to_bed6 - - description: 'Convert SMILES to MOL: ' - title: Convert SMILES to MOL 2.4.1 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_SMILES_to_MOL - - description: 'Convert tabular to CSV: ' - title: Convert tabular to CSV 1.0.0 - url: https://usegalaxy.org.au/root?tool_id=tabular_to_csv - - description: 'Convert MAF to Fasta: ' - title: Convert MAF to Fasta 1.0.2 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_maf_to_fasta_0 - - description: 'Convert plink pbed to ld reduced format: ' - title: Convert plink pbed to ld reduced format 0.02 - url: https://usegalaxy.org.au/root?tool_id=pbed2ldindepconvert - - description: 'Convert CRAM to BAM: ' - title: Convert CRAM to BAM 1.0.2 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_cram_to_bam_0 - - description: 'Convert BED to Feature Location Index: ' - title: Convert BED to Feature Location Index 1.0.0 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_bed_to_fli_0 - - description: 'Convert lped to plink pbed: ' - title: Convert lped to plink pbed 0.02 - url: https://usegalaxy.org.au/root?tool_id=lped2pbedconvert - - description: 'Convert Bam to Bai: ' - title: Convert Bam to Bai 1.0.1 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_Bam_Bai_0 + - description: 'Convert compressed file to uncompressed.: ' + title: Convert compressed file to uncompressed. 1.0.1 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_bz2_to_uncompressed - description: 'Convert BAM to coordinate-sorted BAM: ' title: Convert BAM to coordinate-sorted BAM 1.0.1 url: https://usegalaxy.org.au/root?tool_id=CONVERTER_bam_to_coodinate_sorted_bam - - description: 'Convert BigWig to Wiggle: Convert bigWig to wig' - title: Convert BigWig to Wiggle 377+galaxy0 - url: https://usegalaxy.org.au/root?tool_id=bigwigtowig - - description: 'Convert Genomic Intervals To Strict BED6: ' - title: Convert Genomic Intervals To Strict BED6 1.0.1 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_interval_to_bed6_0 - - description: 'Convert compressed and uncompressed BCF files: ' - title: Convert compressed and uncompressed BCF files 0.0.1 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_bcf_uncompressed_to_bcf - - description: 'Convert MOL2 to MOL: ' - title: Convert MOL2 to MOL 2.4.1 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_mol2_to_mol - - description: 'Convert GFF to Feature Location Index: ' - title: Convert GFF to Feature Location Index 1.0.0 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_gff_to_fli_0 + - description: 'Convert lped to fped: ' + title: Convert lped to fped 0.02 + url: https://usegalaxy.org.au/root?tool_id=lped2fpedconvert - description: 'Convert CSV to tabular: ' title: Convert CSV to tabular 1.0.0 url: https://usegalaxy.org.au/root?tool_id=csv_to_tabular - - description: 'SMILES to SMILES: ' - title: SMILES to SMILES 2.4.1 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_smiles_to_smiles + - description: 'Convert Interval to tabix: ' + title: Convert Interval to tabix 1.0.2 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_interval_to_tabix_0 + - description: 'Convert compressed and uncompressed BCF files: ' + title: Convert compressed and uncompressed BCF files 0.0.1 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_bcf_uncompressed_to_bcf - description: 'Convert GRO to PDB: ' title: Convert GRO to PDB 1.0.0 url: https://usegalaxy.org.au/root?tool_id=CONVERTER_Gro_to_Pdb_0 - - description: 'Convert Genomic Intervals To BED: ' - title: Convert Genomic Intervals To BED 1.0.0 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_interval_to_bed_0 - - description: 'Convert Wiggle to BigWig: ' - title: Convert Wiggle to BigWig 1.0.1 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_wig_to_bigwig - - description: 'Convert MAF to Genomic Intervals: ' - title: Convert MAF to Genomic Intervals 1.0.3 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_maf_to_interval_0 - - description: 'Convert BedGraph to BigWig: ' - title: Convert BedGraph to BigWig 1.0.1 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_bedgraph_to_bigwig - - description: 'Convert plink pbed to linkage lped: ' - title: Convert plink pbed to linkage lped 0.02 - url: https://usegalaxy.org.au/root?tool_id=pbed2lpedconvert - - description: 'Convert BED to GFF: ' - title: Convert BED to GFF 2.0.1 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_bed_to_gff_0 - - description: 'Convert Ref taxonomy to Seq Taxonomy: converts 2 or 3 column sequence - taxonomy file to a 2 column mothur taxonomy_outline format' - title: Convert Ref taxonomy to Seq Taxonomy 1.0.1 - url: https://usegalaxy.org.au/root?tool_id=CONVERTER_ref_to_seq_taxomony + - description: 'Convert BED, GFF, or VCF to BigWig: ' + title: Convert BED, GFF, or VCF to BigWig 1.0.1 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_bed_gff_or_vcf_to_bigwig_0 + - description: 'Convert Picard Interval List to BED6: converter' + title: Convert Picard Interval List to BED6 1.0.1 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_picard_interval_list_to_bed6 + - description: 'Convert FASTA to Bowtie base space Index: ' + title: Convert FASTA to Bowtie base space Index 1.3.1 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_fasta_to_bowtie_base_index + - description: 'Convert plink pbed to ld reduced format: ' + title: Convert plink pbed to ld reduced format 0.02 + url: https://usegalaxy.org.au/root?tool_id=pbed2ldindepconvert + - description: 'Convert SAM to BAM without sorting: ' + title: Convert SAM to BAM without sorting 1.0.1 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_sam_to_unsorted_bam + - description: 'Convert FASTA to Tabular: ' + title: Convert FASTA to Tabular 1.0.1 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_fasta_to_tabular + - description: 'Convert BGZ VCF to tabix: ' + title: Convert BGZ VCF to tabix 1.0.2 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_vcf_bgzip_to_tabix_0 + - description: 'Convert tabular to CSV: ' + title: Convert tabular to CSV 1.0.0 + url: https://usegalaxy.org.au/root?tool_id=tabular_to_csv + - description: 'Convert Genomic Intervals To Strict BED12: ' + title: Convert Genomic Intervals To Strict BED12 1.0.0 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_interval_to_bed12_0 + - description: 'Convert Parquet to csv: ' + title: Convert Parquet to csv 1.0.0 + url: https://usegalaxy.org.au/root?tool_id=CONVERTER_parquet_to_csv homepage: '' id: Galaxy CONVERTER license: ''