diff --git a/data/data.yaml b/data/data.yaml
index 558bacd..9c42e0b 100644
--- a/data/data.yaml
+++ b/data/data.yaml
@@ -2236,6 +2236,36 @@
   resources:
   - title: .nan
     url: .nan
+- biocontainers: bracken
+  biotools: bracken
+  bunya: ''
+  description: Statistical method that computes the abundance of species in DNA sequences
+    from a metagenomics sample.
+  edam-inputs: []
+  edam-operations:
+  - Statistical calculation
+  edam-outputs: []
+  edam-topics:
+  - Metagenomics
+  - Microbial ecology
+  galaxy:
+  - description: 'Bracken: to re-estimate abundance at a taxonomic level from kraken
+      output'
+    title: Bracken 2.9+galaxy0
+    url: https://usegalaxy.org.au/root?tool_id=toolshed.g2.bx.psu.edu%2Frepos%2Fiuc%2Fbracken%2Fest_abundance%2F2.9%2Bgalaxy0
+  homepage: https://ccb.jhu.edu/software/bracken/
+  id: bracken
+  license: GPL-3.0
+  name: Bracken
+  nci-gadi: ''
+  nci-if89: ''
+  pawsey: ''
+  publications:
+  - title: 'Bracken: Estimating species abundance in metagenomics data'
+    url: https://doi.org/10.7717/peerj-cs.104
+  resources:
+  - title: .nan
+    url: .nan
 - biocontainers: braker1
   biotools: braker1
   bunya:
@@ -6494,6 +6524,35 @@
   resources:
   - title: .nan
     url: .nan
+- biocontainers: feelnc
+  biotools: feelnc
+  bunya: ''
+  description: A tool to annotate long non-coding RNAs from RNA-seq assembled transcripts.
+  edam-inputs: []
+  edam-operations:
+  - Annotation
+  edam-outputs: []
+  edam-topics:
+  - RNA-seq
+  - Functional, regulatory and non-coding RNA
+  galaxy:
+  - description: 'FEELnc: FlExible Extraction of LncRNA'
+    title: FEELnc 0.2.1+galaxy0
+    url: https://usegalaxy.org.au/root?tool_id=toolshed.g2.bx.psu.edu%2Frepos%2Fiuc%2Ffeelnc%2Ffeelnc%2F0.2.1%2Bgalaxy0
+  homepage: https://github.com/tderrien/FEELnc
+  id: feelnc
+  license: GPL-3.0
+  name: FEELnc
+  nci-gadi: ''
+  nci-if89: ''
+  pawsey: ''
+  publications:
+  - title: 'FEELnc: A tool for long non-coding RNA annotation and its application
+      to the dog transcriptome'
+    url: https://doi.org/10.1093/nar/gkw1306
+  resources:
+  - title: .nan
+    url: .nan
 - biocontainers: ''
   biotools: ''
   bunya:
@@ -6515,6 +6574,54 @@
   resources:
   - title: .nan
     url: .nan
+- biocontainers: featurecounts
+  biotools: featurecounts
+  bunya: ''
+  description: featureCounts is a very efficient read quantifier. It can be used to
+    summarize RNA-seq reads and gDNA-seq reads to a variety of genomic features such
+    as genes, exons, promoters, gene bodies and genomic bins. It is included in the
+    Bioconductor Rsubread package and also in the SourceForge Subread package.
+  edam-inputs:
+  - formats:
+    - GFF
+    term: GFF
+  - formats:
+    - GTF
+    term: GTF
+  - formats:
+    - BAM
+    term: BAM
+  - formats:
+    - SAM
+    term: SAM
+  edam-operations:
+  - Read summarisation
+  - RNA-Seq quantification
+  edam-outputs:
+  - formats:
+    - DSV
+    term: DSV
+  edam-topics:
+  - RNA-Seq
+  galaxy:
+  - description: 'featureCounts: Measure gene expression in RNA-Seq experiments from
+      SAM or BAM files'
+    title: featureCounts 2.0.3+galaxy2
+    url: https://usegalaxy.org.au/root?tool_id=toolshed.g2.bx.psu.edu%2Frepos%2Fiuc%2Ffeaturecounts%2Ffeaturecounts%2F2.0.3%2Bgalaxy2
+  homepage: http://bioconductor.org/packages/release/bioc/html/Rsubread.html
+  id: featurecounts
+  license: GPL-3.0
+  name: FeatureCounts
+  nci-gadi: ''
+  nci-if89: ''
+  pawsey: ''
+  publications:
+  - title: 'FeatureCounts: An efficient general purpose program for assigning sequence
+      reads to genomic features'
+    url: http://www.ncbi.nlm.nih.gov/pubmed/24227677
+  resources:
+  - title: .nan
+    url: .nan
 - biocontainers: fgenesh
   biotools: fgenesh
   bunya: ''
@@ -7155,190 +7262,190 @@
   - description: 'LAV to BED: Converts a LAV formatted file to BED format'
     title: LAV to BED 1.0.0
     url: https://usegalaxy.org.au/root?tool_id=lav_to_bed1
-  - description: 'Convert BAM to queryname-sorted BAM: '
-    title: Convert BAM to queryname-sorted BAM 1.0.1
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_bam_to_qname_sorted_bam
-  - description: 'Convert Picard Interval List to BED6: converter'
-    title: Convert Picard Interval List to BED6 1.0.1
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_picard_interval_list_to_bed6
-  - description: 'Convert XTC, DCD, and TRR: '
-    title: Convert XTC, DCD, and TRR 1.0.0
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_mdconvert
-  - description: 'Convert Genomic Intervals To Strict BED6: '
-    title: Convert Genomic Intervals To Strict BED6 1.0.1
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_interval_to_bed6_0
-  - description: 'Convert Ref taxonomy to Seq Taxonomy: converts 2 or 3 column sequence
-      taxonomy file to a 2 column mothur taxonomy_outline format'
-    title: Convert Ref taxonomy to Seq Taxonomy 1.0.1
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_ref_to_seq_taxomony
+  - description: 'Convert FASTQ files to seek locations: '
+    title: Convert FASTQ files to seek locations 1.0.1
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_fastq_to_fqtoc0
   - description: 'OpenBabel converter for molecular formats: '
     title: OpenBabel converter for molecular formats 2.4.1
     url: https://usegalaxy.org.au/root?tool_id=CONVERTER_molecules
+  - description: 'Convert uncompressed file to compressed: '
+    title: Convert uncompressed file to compressed 1.16+galaxy0
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_uncompressed_to_gz
+  - description: 'Convert GFF to BED: '
+    title: Convert GFF to BED 1.0.1
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_gff_to_bed_0
+  - description: 'Convert Interval to BGZIP: '
+    title: Convert Interval to BGZIP 1.0.3
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_interval_to_bgzip_0
+  - description: 'Convert BGZ VCF to tabix: '
+    title: Convert BGZ VCF to tabix 1.0.2
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_vcf_bgzip_to_tabix_0
+  - description: 'Convert Bam to Bai: '
+    title: Convert Bam to Bai 1.0.1
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_Bam_Bai_0
+  - description: 'Convert BAM to queryname-sorted BAM: '
+    title: Convert BAM to queryname-sorted BAM 1.0.1
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_bam_to_qname_sorted_bam
+  - description: 'Convert compressed file to uncompressed.: '
+    title: Convert compressed file to uncompressed. 1.0.0
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_gz_to_uncompressed
   - description: 'Convert compressed file to uncompressed.: '
     title: Convert compressed file to uncompressed. 1.0.1
     url: https://usegalaxy.org.au/root?tool_id=CONVERTER_bz2_to_uncompressed
-  - description: 'Convert CRAM to BAM: '
-    title: Convert CRAM to BAM 1.0.2
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_cram_to_bam_0
+  - description: 'Convert Genomic Intervals To Strict BED12: '
+    title: Convert Genomic Intervals To Strict BED12 1.0.0
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_interval_to_bed12_0
+  - description: 'Convert SAM to BigWig: '
+    title: Convert SAM to BigWig 1.0.3
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_sam_to_bigwig_0
   - description: 'Convert Parquet to csv: '
     title: Convert Parquet to csv 1.0.0
     url: https://usegalaxy.org.au/root?tool_id=CONVERTER_parquet_to_csv
-  - description: 'Convert GFF to BED: '
-    title: Convert GFF to BED 1.0.1
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_gff_to_bed_0
+  - description: 'Convert BED, GFF, or VCF to BigWig: '
+    title: Convert BED, GFF, or VCF to BigWig 1.0.1
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_bed_gff_or_vcf_to_bigwig_0
+  - description: 'Convert XTC, DCD, and TRR: '
+    title: Convert XTC, DCD, and TRR 1.0.0
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_mdconvert
+  - description: 'Convert tar to directory: '
+    title: Convert tar to directory 1.0.1
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_tar_to_directory
+  - description: 'Convert neostore.zip files to neostore: '
+    title: Convert neostore.zip files to neostore 1.0.0
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_neostorezip_to_neostore
   - description: 'Convert CSV to tabular: '
     title: Convert CSV to tabular 1.0.0
     url: https://usegalaxy.org.au/root?tool_id=csv_to_tabular
-  - description: 'Convert uncompressed file to compressed: '
-    title: Convert uncompressed file to compressed 1.16+galaxy0
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_uncompressed_to_gz
-  - description: 'Convert Interval to tabix: '
-    title: Convert Interval to tabix 1.0.2
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_interval_to_tabix_0
+  - description: 'Convert FASTA to Bowtie base space Index: '
+    title: Convert FASTA to Bowtie base space Index 1.3.1
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_fasta_to_bowtie_base_index
+  - description: 'Convert GFF to Interval Index: '
+    title: Convert GFF to Interval Index 1.0.1
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_gff_to_interval_index_0
+  - description: 'Convert FASTA to Bowtie color space Index: '
+    title: Convert FASTA to Bowtie color space Index 1.2.3
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_fasta_to_bowtie_color_index
+  - description: 'Convert CML to SMILES: '
+    title: Convert CML to SMILES 2.4.1
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_cml_to_smiles
   - description: 'Convert BAM to BigWig: '
     title: Convert BAM to BigWig 1.0.2
     url: https://usegalaxy.org.au/root?tool_id=CONVERTER_bam_to_bigwig_0
-  - description: 'Convert compressed file to uncompressed.: '
-    title: Convert compressed file to uncompressed. 1.0.0
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_gz_to_uncompressed
-  - description: 'Convert SAM to BAM without sorting: '
-    title: Convert SAM to BAM without sorting 1.0.1
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_sam_to_unsorted_bam
-  - description: 'Convert tabular to dbnsfp: '
-    title: Convert tabular to dbnsfp 1.0.2
-    url: https://usegalaxy.org.au/root?tool_id=tabular_to_dbnsfp
-  - description: 'Convert BED to Feature Location Index: '
-    title: Convert BED to Feature Location Index 1.0.0
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_bed_to_fli_0
-  - description: 'Convert FASTA to len file: '
-    title: Convert FASTA to len file 1.0.1
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_fasta_to_len
   - description: 'Convert Wiggle to Interval: '
     title: Convert Wiggle to Interval 1.0.1
     url: https://usegalaxy.org.au/root?tool_id=CONVERTER_wiggle_to_interval_0
-  - description: 'Convert tar to directory: '
-    title: Convert tar to directory 1.0.1
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_tar_to_directory
-  - description: 'Convert Interval to BGZIP: '
-    title: Convert Interval to BGZIP 1.0.3
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_interval_to_bgzip_0
-  - description: 'Convert FASTQ files to seek locations: '
-    title: Convert FASTQ files to seek locations 1.0.1
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_fastq_to_fqtoc0
-  - description: 'Convert Genomic Intervals To Strict BED12: '
-    title: Convert Genomic Intervals To Strict BED12 1.0.0
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_interval_to_bed12_0
-  - description: 'Convert neostore.zip files to neostore: '
-    title: Convert neostore.zip files to neostore 1.0.0
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_neostorezip_to_neostore
+  - description: 'Convert Genomic Intervals To Coverage: '
+    title: Convert Genomic Intervals To Coverage 1.0.1
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_interval_to_bigwig_0
   - description: 'Convert BigWig to Wiggle: Convert bigWig to wig'
     title: Convert BigWig to Wiggle 377+galaxy0
     url: https://usegalaxy.org.au/root?tool_id=bigwigtowig
-  - description: 'Convert GFF to Interval Index: '
-    title: Convert GFF to Interval Index 1.0.1
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_gff_to_interval_index_0
-  - description: 'Convert tabular to CSV: '
-    title: Convert tabular to CSV 1.0.0
-    url: https://usegalaxy.org.au/root?tool_id=tabular_to_csv
-  - description: 'Convert BED, GFF, or VCF to BigWig: '
-    title: Convert BED, GFF, or VCF to BigWig 1.0.1
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_bed_gff_or_vcf_to_bigwig_0
   - description: 'Convert Biom datasets: '
     title: Convert Biom datasets 2.1.5
     url: https://usegalaxy.org.au/root?tool_id=CONVERTER_biom
-  - description: 'Convert compressed and uncompressed BCF files: '
-    title: Convert compressed and uncompressed BCF files 0.0.1
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_bcf_uncompressed_to_bcf
-  - description: 'Convert BGZ VCF to tabix: '
-    title: Convert BGZ VCF to tabix 1.0.2
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_vcf_bgzip_to_tabix_0
-  - description: 'Convert CML to SMILES: '
-    title: Convert CML to SMILES 2.4.1
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_cml_to_smiles
-  - description: 'Convert MAF to Fasta: '
-    title: Convert MAF to Fasta 1.0.2
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_maf_to_fasta_0
-  - description: 'Convert lped to fped: '
-    title: Convert lped to fped 0.02
-    url: https://usegalaxy.org.au/root?tool_id=lped2fpedconvert
+  - description: 'Convert tabular to CSV: '
+    title: Convert tabular to CSV 1.0.0
+    url: https://usegalaxy.org.au/root?tool_id=tabular_to_csv
+  - description: 'Convert Interval to tabix: '
+    title: Convert Interval to tabix 1.0.2
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_interval_to_tabix_0
+  - description: 'Convert plink pbed to ld reduced format: '
+    title: Convert plink pbed to ld reduced format 0.02
+    url: https://usegalaxy.org.au/root?tool_id=pbed2ldindepconvert
   - description: 'Convert PDB to GRO: '
     title: Convert PDB to GRO 1.0.0
     url: https://usegalaxy.org.au/root?tool_id=CONVERTER_Pdb_to_Gro_0
-  - description: 'Convert Genomic Intervals To BED: '
-    title: Convert Genomic Intervals To BED 1.0.0
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_interval_to_bed_0
+  - description: 'Convert lped to fped: '
+    title: Convert lped to fped 0.02
+    url: https://usegalaxy.org.au/root?tool_id=lped2fpedconvert
+  - description: 'Convert InChI to MOL: '
+    title: Convert InChI to MOL 2.4.1
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_inchi_to_mol
+  - description: 'Convert tabular to dbnsfp: '
+    title: Convert tabular to dbnsfp 1.0.2
+    url: https://usegalaxy.org.au/root?tool_id=tabular_to_dbnsfp
+  - description: 'Convert Picard Interval List to BED6: converter'
+    title: Convert Picard Interval List to BED6 1.0.1
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_picard_interval_list_to_bed6
+  - description: 'Convert SMILES to MOL: '
+    title: Convert SMILES to MOL 2.4.1
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_SMILES_to_MOL
+  - description: 'Convert SAM to BAM without sorting: '
+    title: Convert SAM to BAM without sorting 1.0.1
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_sam_to_unsorted_bam
   - description: 'Convert FASTA to 2bit: '
     title: Convert FASTA to 2bit 1.0.1
     url: https://usegalaxy.org.au/root?tool_id=CONVERTER_fasta_to_2bit
+  - description: 'Convert MAF to Genomic Intervals: '
+    title: Convert MAF to Genomic Intervals 1.0.3
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_maf_to_interval_0
+  - description: 'Convert BED to Feature Location Index: '
+    title: Convert BED to Feature Location Index 1.0.0
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_bed_to_fli_0
+  - description: 'Convert MAF to Fasta: '
+    title: Convert MAF to Fasta 1.0.2
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_maf_to_fasta_0
   - description: 'Convert BAM to coordinate-sorted BAM: '
     title: Convert BAM to coordinate-sorted BAM 1.0.1
     url: https://usegalaxy.org.au/root?tool_id=CONVERTER_bam_to_coodinate_sorted_bam
-  - description: 'Convert FASTA to Tabular: '
-    title: Convert FASTA to Tabular 1.0.1
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_fasta_to_tabular
-  - description: 'Convert Bam to Bai: '
-    title: Convert Bam to Bai 1.0.1
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_Bam_Bai_0
+  - description: 'Convert CRAM to BAM: '
+    title: Convert CRAM to BAM 1.0.2
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_cram_to_bam_0
   - description: 'Convert lped to plink pbed: '
     title: Convert lped to plink pbed 0.02
     url: https://usegalaxy.org.au/root?tool_id=lped2pbedconvert
-  - description: 'Convert SMILES to MOL: '
-    title: Convert SMILES to MOL 2.4.1
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_SMILES_to_MOL
-  - description: 'Convert BedGraph to BigWig: '
-    title: Convert BedGraph to BigWig 1.0.1
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_bedgraph_to_bigwig
-  - description: 'Convert GFF to Feature Location Index: '
-    title: Convert GFF to Feature Location Index 1.0.0
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_gff_to_fli_0
-  - description: 'Convert MAF to Genomic Intervals: '
-    title: Convert MAF to Genomic Intervals 1.0.3
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_maf_to_interval_0
-  - description: 'Convert FASTA to Bowtie base space Index: '
-    title: Convert FASTA to Bowtie base space Index 1.3.1
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_fasta_to_bowtie_base_index
   - description: 'Convert MOL2 to MOL: '
     title: Convert MOL2 to MOL 2.4.1
     url: https://usegalaxy.org.au/root?tool_id=CONVERTER_mol2_to_mol
-  - description: 'Convert BED to GFF: '
-    title: Convert BED to GFF 2.0.1
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_bed_to_gff_0
+  - description: 'Convert compressed and uncompressed BCF files: '
+    title: Convert compressed and uncompressed BCF files 0.0.1
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_bcf_uncompressed_to_bcf
+  - description: 'Convert Genomic Intervals To BED: '
+    title: Convert Genomic Intervals To BED 1.0.0
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_interval_to_bed_0
+  - description: 'SMILES to SMILES: '
+    title: SMILES to SMILES 2.4.1
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_smiles_to_smiles
+  - description: 'Convert BedGraph to BigWig: '
+    title: Convert BedGraph to BigWig 1.0.1
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_bedgraph_to_bigwig
+  - description: 'Convert FASTA to len file: '
+    title: Convert FASTA to len file 1.0.1
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_fasta_to_len
+  - description: 'Convert GRO to PDB: '
+    title: Convert GRO to PDB 1.0.0
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_Gro_to_Pdb_0
   - description: 'Convert Wiggle to BigWig: '
     title: Convert Wiggle to BigWig 1.0.1
     url: https://usegalaxy.org.au/root?tool_id=CONVERTER_wig_to_bigwig
-  - description: 'Convert Genomic Intervals To Coverage: '
-    title: Convert Genomic Intervals To Coverage 1.0.1
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_interval_to_bigwig_0
+  - description: 'Convert FASTA to Tabular: '
+    title: Convert FASTA to Tabular 1.0.1
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_fasta_to_tabular
+  - description: 'Convert BED to GFF: '
+    title: Convert BED to GFF 2.0.1
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_bed_to_gff_0
+  - description: 'Convert Genomic Intervals To Strict BED6: '
+    title: Convert Genomic Intervals To Strict BED6 1.0.1
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_interval_to_bed6_0
   - description: 'Convert plink pbed to linkage lped: '
     title: Convert plink pbed to linkage lped 0.02
     url: https://usegalaxy.org.au/root?tool_id=pbed2lpedconvert
   - description: 'Convert Genomic Intervals To Strict BED: '
     title: Convert Genomic Intervals To Strict BED 1.0.1
     url: https://usegalaxy.org.au/root?tool_id=CONVERTER_interval_to_bedstrict_0
-  - description: 'Convert GRO to PDB: '
-    title: Convert GRO to PDB 1.0.0
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_Gro_to_Pdb_0
   - description: 'Convert Len file to Linecount: '
     title: Convert Len file to Linecount 1.0.1
     url: https://usegalaxy.org.au/root?tool_id=CONVERTER_len_to_linecount
-  - description: 'SMILES to SMILES: '
-    title: SMILES to SMILES 2.4.1
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_smiles_to_smiles
+  - description: 'Convert GFF to Feature Location Index: '
+    title: Convert GFF to Feature Location Index 1.0.0
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_gff_to_fli_0
   - description: 'Convert FASTA to fai file: '
     title: Convert FASTA to fai file 1.0.1
     url: https://usegalaxy.org.au/root?tool_id=CONVERTER_fasta_to_fai
-  - description: 'Convert FASTA to Bowtie color space Index: '
-    title: Convert FASTA to Bowtie color space Index 1.2.3
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_fasta_to_bowtie_color_index
-  - description: 'Convert SAM to BigWig: '
-    title: Convert SAM to BigWig 1.0.3
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_sam_to_bigwig_0
-  - description: 'Convert InChI to MOL: '
-    title: Convert InChI to MOL 2.4.1
-    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_inchi_to_mol
-  - description: 'Convert plink pbed to ld reduced format: '
-    title: Convert plink pbed to ld reduced format 0.02
-    url: https://usegalaxy.org.au/root?tool_id=pbed2ldindepconvert
+  - description: 'Convert Ref taxonomy to Seq Taxonomy: converts 2 or 3 column sequence
+      taxonomy file to a 2 column mothur taxonomy_outline format'
+    title: Convert Ref taxonomy to Seq Taxonomy 1.0.1
+    url: https://usegalaxy.org.au/root?tool_id=CONVERTER_ref_to_seq_taxomony
   homepage: ''
   id: Galaxy CONVERTER
   license: ''
@@ -7383,6 +7490,10 @@
   - description: 'modENCODE worm: server'
     title: modENCODE worm 1.0.1
     url: https://usegalaxy.org.au//tool_runner/data_source_redirect?tool_id=modENCODEworm
+  - description: 'EBI SCXA Data Retrieval: Retrieves expression matrixes and metadata
+      from EBI Single Cell Expression Atlas (SCXA)'
+    title: EBI SCXA Data Retrieval v0.0.2+galaxy2
+    url: https://usegalaxy.org.au/root?tool_id=toolshed.g2.bx.psu.edu%2Frepos%2Febi-gxa%2Fretrieve_scxa%2Fretrieve_scxa%2Fv0.0.2%2Bgalaxy2
   homepage: ''
   id: galaxy_data_sources
   license: ''
@@ -7709,6 +7820,13 @@
   - description: 'Secure Hash / Message Digest: on a dataset'
     title: Secure Hash / Message Digest 0.0.2
     url: https://usegalaxy.org.au/root?tool_id=secure_hash_message_digest
+  - description: 'Add line to file: writes a line of text at the begining or end of
+      a text file.'
+    title: Add line to file 0.1.0
+    url: https://usegalaxy.org.au/root?tool_id=toolshed.g2.bx.psu.edu%2Frepos%2Fbgruening%2Fadd_line_to_file%2Fadd_line_to_file%2F0.1.0
+  - description: 'Remove columns: by heading'
+    title: Remove columns 1.0
+    url: https://usegalaxy.org.au/root?tool_id=toolshed.g2.bx.psu.edu%2Frepos%2Fiuc%2Fcolumn_remove_by_header%2Fcolumn_remove_by_header%2F1.0
   - description: 'Pick parameter value: '
     title: Pick parameter value 0.2.0
     url: https://usegalaxy.org.au/root?tool_id=toolshed.g2.bx.psu.edu%2Frepos%2Fiuc%2Fpick_value%2Fpick_value%2F0.2.0
@@ -8390,6 +8508,9 @@
   - description: 'Get organelle from reads: '
     title: Get organelle from reads 1.7.7.1+galaxy0
     url: https://usegalaxy.org.au/root?tool_id=toolshed.g2.bx.psu.edu%2Frepos%2Fiuc%2Fgetorganelle%2Fget_organelle_from_reads%2F1.7.7.1%2Bgalaxy0
+  - description: 'Get annotated regions from genbank files (getorganelle): '
+    title: Get annotated regions from genbank files (getorganelle) 0.1.0
+    url: https://usegalaxy.org.au/root?tool_id=toolshed.g2.bx.psu.edu%2Frepos%2Fiuc%2Fgetorganelle%2Fget_annotated_regions_from_gb%2F0.1.0
   homepage: https://github.com/Kinggerm/GetOrganelle
   id: getorganelle
   license: GPL-3.0
@@ -13758,6 +13879,35 @@
   resources:
   - title: .nan
     url: .nan
+- biocontainers: mosdepth
+  biotools: mosdepth
+  bunya: ''
+  description: Fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing.
+  edam-inputs: []
+  edam-operations:
+  - Nucleic acid sequence analysis
+  - Read depth analysis
+  edam-outputs: []
+  edam-topics:
+  - Statistics and probability
+  - Data quality management
+  galaxy:
+  - description: 'mosdepth: - fast and flexible depth coverage calculation'
+    title: mosdepth 0.3.8+galaxy0
+    url: https://usegalaxy.org.au/root?tool_id=toolshed.g2.bx.psu.edu%2Frepos%2Fiuc%2Fmosdepth%2Fmosdepth%2F0.3.8%2Bgalaxy0
+  homepage: https://github.com/brentp/mosdepth
+  id: mosdepth
+  license: MIT
+  name: mosdepth
+  nci-gadi: ''
+  nci-if89: ''
+  pawsey: ''
+  publications:
+  - title: 'Mosdepth: Quick coverage calculation for genomes and exomes'
+    url: https://doi.org/10.1093/bioinformatics/btx699
+  resources:
+  - title: .nan
+    url: .nan
 - biocontainers: mothur
   biotools: mothur
   bunya: ''