Run Demo Arabidopsis 360 Population

To run the Arabidopsis 360 Demo, users must download the raw data file, genotype data files, genotype map files, Haploview files, and GFF files from Cyverse. In order to do so, users must first create an account with Cyverse. Go to https://de.cyverse.org/de and click register to make a new account. Users who already have a Cyverse account can ignore this step.

iCommands software needs to be installed on the machine that is being used to download the data. To install iCommands and initialize iRODS connection, go to https://cyverse.atlassian.net/wiki/spaces/DS/pages/241869823/Setting+Up+iCommands and follow the instructions on the website.