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pyproject.toml
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pyproject.toml
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[build-system]
requires = ["pdm-pep517>=1.0.0"]
build-backend = "pdm.pep517.api"
[project]
name = "serotiny"
version = "1.0.1"
description = "A framework of tools to structure, configure and drive deep learning projects"
readme = "README.md"
classifiers = ["Natural Language :: English", "Programming Language :: Python :: 3.8", "Programming Language :: Python :: 3.9", "Programming Language :: Python :: 3.10", "Natural Language :: English", "Programming Language :: Python :: 3.8", "Programming Language :: Python :: 3.9", "Programming Language :: Python :: 3.10"]
license = {text = "BSD-3"}
authors = [
{name = "Guilherme Pires", email = "[email protected]"},
{name = "Ryan Spangler", email = "[email protected]"},
{name = "Ritvik Vasan", email = "[email protected]"},
{name = "Theo Knijnenburg", email = "[email protected]"},
{name = "Nick Gomez", email = "[email protected]"},
{name = "Caleb Chan", email = "[email protected]"},
]
requires-python = ">=3.8,<4.0"
dependencies = [
"pip",
"torch",
"fire",
"makefun",
"hydra-core",
"joblib",
"mlflow",
"nbformat",
"omegaconf",
"pyarrow",
"pytorch-lightning",
"PyYAML",
"scikit-learn",
"aicsimageio",
"numpy",
"pandas",
"universal-pathlib",
"s3fs",
"fsspec",
"pycryptodome",
"frozendict",
"ome-zarr",
"protobuf",
"jupyter-core",
"grpcio",
"anndata",
"monai",
"pip",
"torch",
"fire",
"makefun",
"hydra-core",
"joblib",
"mlflow",
"nbformat",
"omegaconf",
"pyarrow",
"pytorch-lightning",
"PyYAML",
"scikit-learn",
"aicsimageio",
"numpy",
"pandas",
"universal-pathlib",
"s3fs",
"fsspec",
"pycryptodome",
"frozendict",
"ome-zarr",
"protobuf",
"jupyter-core",
"grpcio",
"anndata",
"monai",
]
[project.urls]
homepage = "https://allencell.github.io/serotiny"
repository = "https://github.com/AllenCell/serotiny"
documentation = "https://allencell.github.io/serotiny"
[project.optional-dependencies]
docs = [
"furo",
"m2r2",
"sphinx",
]
test = [
"pre-commit",
"pytest",
"pytest-cov",
"tox",
]
dev = [
"pre-commit",
]
modin = [
"modin"
]
[project.scripts]
serotiny = "serotiny.cli.cli:main"
[tool.pdm.build]
includes = ["serotiny", "LICENSE"]
excludes = ["**/*.pyc", "**/__pycache__"]
[tool.flake8]
exclude = "docs/"
ignore = [
"E203",
"E402",
"W291",
"W503"
]
max-line-length = 88