diff --git a/examples/full_fledged_schema_examples/CaulsalLoopDiagrams/create_a_causalLoopDiagram.ipynb b/examples/full_fledged_schema_examples/CaulsalLoopDiagrams/create_a_causalLoopDiagram.ipynb
deleted file mode 100644
index bdba12ce..00000000
--- a/examples/full_fledged_schema_examples/CaulsalLoopDiagrams/create_a_causalLoopDiagram.ipynb
+++ /dev/null
@@ -1,206 +0,0 @@
-{
- "cells": [
- {
- "cell_type": "code",
- "execution_count": 1,
- "metadata": {},
- "outputs": [],
- "source": [
- "using StockFlow"
- ]
- },
- {
- "cell_type": "code",
- "execution_count": 4,
- "metadata": {},
- "outputs": [
- {
- "data": {
- "text/html": [
- "
\n",
- "
CausalLoop {V:3, E:4, Name:0}\n",
- "
\n",
- " \n",
- " \n",
- " \n",
- " \n",
- " \n",
- " 1 | \n",
- " S | \n",
- "
\n",
- " \n",
- " 2 | \n",
- " i | \n",
- "
\n",
- " \n",
- " 3 | \n",
- " I | \n",
- "
\n",
- " \n",
- "
\n",
- "
\n",
- " \n",
- " \n",
- " \n",
- " \n",
- " \n",
- " 1 | \n",
- " 1 | \n",
- " 2 | \n",
- "
\n",
- " \n",
- " 2 | \n",
- " 2 | \n",
- " 1 | \n",
- "
\n",
- " \n",
- " 3 | \n",
- " 2 | \n",
- " 3 | \n",
- "
\n",
- " \n",
- " 4 | \n",
- " 3 | \n",
- " 2 | \n",
- "
\n",
- " \n",
- "
\n",
- "
\n"
- ],
- "text/plain": [
- "CausalLoop {V:3, E:4, Name:0}\n",
- "┌───┬───────┐\n",
- "│\u001b[1m V \u001b[0m│\u001b[1m vname \u001b[0m│\n",
- "├───┼───────┤\n",
- "│\u001b[1m 1 \u001b[0m│ S │\n",
- "│\u001b[1m 2 \u001b[0m│ i │\n",
- "│\u001b[1m 3 \u001b[0m│ I │\n",
- "└───┴───────┘\n",
- "┌───┬─────┬─────┐\n",
- "│\u001b[1m E \u001b[0m│\u001b[1m src \u001b[0m│\u001b[1m tgt \u001b[0m│\n",
- "├───┼─────┼─────┤\n",
- "│\u001b[1m 1 \u001b[0m│ 1 │ 2 │\n",
- "│\u001b[1m 2 \u001b[0m│ 2 │ 1 │\n",
- "│\u001b[1m 3 \u001b[0m│ 2 │ 3 │\n",
- "│\u001b[1m 4 \u001b[0m│ 3 │ 2 │\n",
- "└───┴─────┴─────┘\n"
- ]
- },
- "execution_count": 4,
- "metadata": {},
- "output_type": "execute_result"
- }
- ],
- "source": [
- "# test the causal loop diagram\n",
- "si_causalLoop=CausalLoop(\n",
- " [:S,:i,:I],\n",
- " [:S=>:i,:i=>:S,:i=>:I,:I=>:i]\n",
- ")"
- ]
- },
- {
- "cell_type": "code",
- "execution_count": 5,
- "metadata": {},
- "outputs": [
- {
- "data": {
- "image/svg+xml": [
- "\n",
- "\n",
- "\n",
- "\n",
- "\n"
- ],
- "text/plain": [
- "Catlab.Graphics.Graphviz.Graph(\"G\", true, \"dot\", Catlab.Graphics.Graphviz.Statement[Catlab.Graphics.Graphviz.Node(\"n1\", OrderedCollections.OrderedDict{Symbol, Union{String, Catlab.Graphics.Graphviz.Html}}(:label => \"S\", :shape => \"plaintext\")), Catlab.Graphics.Graphviz.Node(\"n2\", OrderedCollections.OrderedDict{Symbol, Union{String, Catlab.Graphics.Graphviz.Html}}(:label => \"i\", :shape => \"plaintext\")), Catlab.Graphics.Graphviz.Node(\"n3\", OrderedCollections.OrderedDict{Symbol, Union{String, Catlab.Graphics.Graphviz.Html}}(:label => \"I\", :shape => \"plaintext\")), Catlab.Graphics.Graphviz.Edge(Catlab.Graphics.Graphviz.NodeID[Catlab.Graphics.Graphviz.NodeID(\"n1\", \"\", \"\"), Catlab.Graphics.Graphviz.NodeID(\"n2\", \"\", \"\")], OrderedCollections.OrderedDict{Symbol, Union{String, Catlab.Graphics.Graphviz.Html}}(:color => \"blue\")), Catlab.Graphics.Graphviz.Edge(Catlab.Graphics.Graphviz.NodeID[Catlab.Graphics.Graphviz.NodeID(\"n2\", \"\", \"\"), Catlab.Graphics.Graphviz.NodeID(\"n1\", \"\", \"\")], OrderedCollections.OrderedDict{Symbol, Union{String, Catlab.Graphics.Graphviz.Html}}(:color => \"blue\")), Catlab.Graphics.Graphviz.Edge(Catlab.Graphics.Graphviz.NodeID[Catlab.Graphics.Graphviz.NodeID(\"n2\", \"\", \"\"), Catlab.Graphics.Graphviz.NodeID(\"n3\", \"\", \"\")], OrderedCollections.OrderedDict{Symbol, Union{String, Catlab.Graphics.Graphviz.Html}}(:color => \"blue\")), Catlab.Graphics.Graphviz.Edge(Catlab.Graphics.Graphviz.NodeID[Catlab.Graphics.Graphviz.NodeID(\"n3\", \"\", \"\"), Catlab.Graphics.Graphviz.NodeID(\"n2\", \"\", \"\")], OrderedCollections.OrderedDict{Symbol, Union{String, Catlab.Graphics.Graphviz.Html}}(:color => \"blue\"))], OrderedCollections.OrderedDict{Symbol, Union{String, Catlab.Graphics.Graphviz.Html}}(:rankdir => \"LR\"), OrderedCollections.OrderedDict{Symbol, Union{String, Catlab.Graphics.Graphviz.Html}}(), OrderedCollections.OrderedDict{Symbol, Union{String, Catlab.Graphics.Graphviz.Html}}())"
- ]
- },
- "execution_count": 5,
- "metadata": {},
- "output_type": "execute_result"
- }
- ],
- "source": [
- "GraphCL(si_causalLoop)"
- ]
- },
- {
- "cell_type": "code",
- "execution_count": null,
- "metadata": {},
- "outputs": [],
- "source": []
- }
- ],
- "metadata": {
- "kernelspec": {
- "display_name": "Julia 1.10.4",
- "language": "julia",
- "name": "julia-1.10"
- },
- "language_info": {
- "file_extension": ".jl",
- "mimetype": "application/julia",
- "name": "julia",
- "version": "1.10.4"
- }
- },
- "nbformat": 4,
- "nbformat_minor": 4
-}
diff --git a/examples/full_fledged_schema_examples/CaulsalLoopDiagrams/convert_from_SEIR_stockFlowDiagram.ipynb b/examples/full_fledged_schema_examples/CausalLoopDiagrams/convert_from_SEIR_stockFlowDiagram.ipynb
similarity index 58%
rename from examples/full_fledged_schema_examples/CaulsalLoopDiagrams/convert_from_SEIR_stockFlowDiagram.ipynb
rename to examples/full_fledged_schema_examples/CausalLoopDiagrams/convert_from_SEIR_stockFlowDiagram.ipynb
index ea62d0c3..f6330b74 100644
--- a/examples/full_fledged_schema_examples/CaulsalLoopDiagrams/convert_from_SEIR_stockFlowDiagram.ipynb
+++ b/examples/full_fledged_schema_examples/CausalLoopDiagrams/convert_from_SEIR_stockFlowDiagram.ipynb
@@ -27,9 +27,8 @@
"f_deathR (generic function with 1 method)"
]
},
- "execution_count": 2,
"metadata": {},
- "output_type": "execute_result"
+ "output_type": "display_data"
}
],
"source": [
@@ -464,9 +463,8 @@
"└─────┴───────┴──────┘\n"
]
},
- "execution_count": 3,
"metadata": {},
- "output_type": "execute_result"
+ "output_type": "display_data"
}
],
"source": [
@@ -500,331 +498,330 @@
"\n",
"\n",
- "\n",
"\n",
- "