diff --git a/.gitignore b/.gitignore index 993d8168b..afebc75d6 100644 --- a/.gitignore +++ b/.gitignore @@ -5,9 +5,7 @@ .ipynb_checkpoints # Julia +Manifest.toml *.jl.cov *.jl.*.cov *.jl.mem - -# Examples -experiments/*/Manifest.toml diff --git a/Manifest.toml b/Manifest.toml deleted file mode 100644 index 4679f11a1..000000000 --- a/Manifest.toml +++ /dev/null @@ -1,308 +0,0 @@ -# This file is machine-generated - editing it directly is not advised - -[[ArnoldiMethod]] -deps = ["DelimitedFiles", "LinearAlgebra", "Random", "SparseArrays", "StaticArrays", "Test"] -git-tree-sha1 = "2b6845cea546604fb4dca4e31414a6a59d39ddcd" -uuid = "ec485272-7323-5ecc-a04f-4719b315124d" -version = "0.0.4" - -[[ArrayInterface]] -deps = ["LinearAlgebra", "Requires", "SparseArrays"] -git-tree-sha1 = "851de9a8acd7b8863aa2ec2af0a44f375502c878" -uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" -version = "2.9.0" - -[[AutoHashEquals]] -git-tree-sha1 = "45bb6705d93be619b81451bb2006b7ee5d4e4453" -uuid = "15f4f7f2-30c1-5605-9d31-71845cf9641f" -version = "0.2.0" - 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-[[Compose]] -deps = ["Base64", "Colors", "DataStructures", "Dates", "IterTools", "JSON", "LinearAlgebra", "Measures", "Printf", "Random", "Requires", "Statistics", "UUIDs"] -git-tree-sha1 = "157b75f64c26f36b55b5456dff08e524e591ec8d" -uuid = "a81c6b42-2e10-5240-aca2-a61377ecd94b" -version = "0.9.0" - -[[DataStructures]] -deps = ["InteractiveUtils", "OrderedCollections"] -git-tree-sha1 = "edad9434967fdc0a2631a65d902228400642120c" -uuid = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8" -version = "0.17.19" - -[[Dates]] -deps = ["Printf"] -uuid = "ade2ca70-3891-5945-98fb-dc099432e06a" - -[[DelimitedFiles]] -deps = ["Mmap"] -uuid = "8bb1440f-4735-579b-a4ab-409b98df4dab" - -[[Distributed]] -deps = ["Random", "Serialization", "Sockets"] -uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" - -[[FastClosures]] -git-tree-sha1 = "acebe244d53ee1b461970f8910c235b259e772ef" -uuid = "9aa1b823-49e4-5ca5-8b0f-3971ec8bab6a" -version = "0.3.2" - -[[FileIO]] -deps = ["Pkg"] -git-tree-sha1 = "202335fd24c2776493e198d6c66a6d910400a895" -uuid = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549" -version = "1.3.0" - 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-[[LabelledArrays]] -deps = ["ArrayInterface", "LinearAlgebra", "MacroTools", "StaticArrays"] -git-tree-sha1 = "f6def2c9c88908fdde81b9a39c236cf69de94450" -uuid = "2ee39098-c373-598a-b85f-a56591580800" -version = "1.2.2" - -[[LibGit2]] -deps = ["Printf"] -uuid = "76f85450-5226-5b5a-8eaa-529ad045b433" - -[[Libdl]] -uuid = "8f399da3-3557-5675-b5ff-fb832c97cbdb" - -[[Libiconv_jll]] -deps = ["Libdl", "Pkg"] -git-tree-sha1 = "c9d4035d7481bcdff2babf5a55525a818ef8ed8f" -uuid = "94ce4f54-9a6c-5748-9c1c-f9c7231a4531" -version = "1.16.0+5" - -[[LightGraphs]] -deps = ["ArnoldiMethod", "DataStructures", "Distributed", "Inflate", "LinearAlgebra", "Random", "SharedArrays", "SimpleTraits", "SparseArrays", "Statistics"] -git-tree-sha1 = "6f85a35d2377cb2db1bc448ed0d6340d2bb1ea64" -uuid = "093fc24a-ae57-5d10-9952-331d41423f4d" -version = "1.3.3" - -[[LightXML]] -deps = ["Libdl", "XML2_jll"] -git-tree-sha1 = "e129d9391168c677cd4800f5c0abb1ed8cb3794f" -uuid = "9c8b4983-aa76-5018-a973-4c85ecc9e179" -version = "0.9.0" - 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-[[MetaGraphs]] -deps = ["JLD2", "LightGraphs", "Random"] -git-tree-sha1 = "8900d368fa44bd61c7e598d6a0f577e347f3cf67" -uuid = "626554b9-1ddb-594c-aa3c-2596fe9399a5" -version = "0.6.5" - -[[Mmap]] -uuid = "a63ad114-7e13-5084-954f-fe012c677804" - -[[OrderedCollections]] -git-tree-sha1 = "293b70ac1780f9584c89268a6e2a560d938a7065" -uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d" -version = "1.3.0" - -[[Parsers]] -deps = ["Dates", "Test"] -git-tree-sha1 = "20ef902ea02f7000756a4bc19f7b9c24867c6211" -uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" -version = "1.0.6" - -[[Pkg]] -deps = ["Dates", "LibGit2", "Libdl", "Logging", "Markdown", "Printf", "REPL", "Random", "SHA", "UUIDs"] -uuid = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f" - -[[Printf]] -deps = ["Unicode"] -uuid = "de0858da-6303-5e67-8744-51eddeeeb8d7" - -[[REPL]] -deps = ["InteractiveUtils", "Markdown", "Sockets"] -uuid = "3fa0cd96-eef1-5676-8a61-b3b8758bbffb" - -[[Random]] -deps = ["Serialization"] -uuid = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c" - -[[RecipesBase]] -git-tree-sha1 = "54f8ceb165a0f6d083f0d12cb4996f5367c6edbc" -uuid = "3cdcf5f2-1ef4-517c-9805-6587b60abb01" -version = "1.0.1" - -[[Reexport]] -deps = ["Pkg"] -git-tree-sha1 = "7b1d07f411bc8ddb7977ec7f377b97b158514fe0" -uuid = "189a3867-3050-52da-a836-e630ba90ab69" -version = "0.2.0" - -[[Requires]] -deps = ["UUIDs"] -git-tree-sha1 = "d37400976e98018ee840e0ca4f9d20baa231dc6b" -uuid = "ae029012-a4dd-5104-9daa-d747884805df" -version = "1.0.1" - -[[SHA]] -uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce" - -[[Serialization]] -uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b" - -[[SharedArrays]] -deps = ["Distributed", "Mmap", "Random", "Serialization"] -uuid = "1a1011a3-84de-559e-8e89-a11a2f7dc383" - -[[SimpleTraits]] -deps = ["InteractiveUtils", "MacroTools"] -git-tree-sha1 = "2ee666b24ab8be6a922f9d6c11a86e1a703a7dda" -uuid = "699a6c99-e7fa-54fc-8d76-47d257e15c1d" -version = "0.9.2" - -[[Sockets]] -uuid = "6462fe0b-24de-5631-8697-dd941f90decc" - -[[SparseArrays]] -deps = ["LinearAlgebra", "Random"] -uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" - -[[StaticArrays]] -deps = ["LinearAlgebra", "Random", "Statistics"] -git-tree-sha1 = "5c06c0aeb81bef54aed4b3f446847905eb6cbda0" -uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "0.12.3" - -[[Statistics]] -deps = ["LinearAlgebra", "SparseArrays"] -uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" - -[[Test]] -deps = ["Distributed", "InteractiveUtils", "Logging", "Random"] -uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40" - -[[TimerOutputs]] -deps = ["Printf"] -git-tree-sha1 = "f458ca23ff80e46a630922c555d838303e4b9603" -uuid = "a759f4b9-e2f1-59dc-863e-4aeb61b1ea8f" -version = "0.5.6" - -[[TranscodingStreams]] -deps = ["Random", "Test"] -git-tree-sha1 = "7c53c35547de1c5b9d46a4797cf6d8253807108c" -uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa" -version = "0.9.5" - -[[UUIDs]] -deps = ["Random", "SHA"] -uuid = "cf7118a7-6976-5b1a-9a39-7adc72f591a4" - -[[Unicode]] -uuid = "4ec0a83e-493e-50e2-b9ac-8f72acf5a8f5" - -[[XML2_jll]] -deps = ["Libdl", "Libiconv_jll", "Pkg", "Zlib_jll"] -git-tree-sha1 = "432d91f45e950f2f2bda5c0f4e2b938c14493af9" -uuid = "02c8fc9c-b97f-50b9-bbe4-9be30ff0a78a" -version = "2.9.10+1" - -[[Zlib_jll]] -deps = ["Libdl", "Pkg"] -git-tree-sha1 = "622d8b6dc0c7e8029f17127703de9819134d1b71" -uuid = "83775a58-1f1d-513f-b197-d71354ab007a" -version = "1.2.11+14" diff --git a/docs/Manifest.toml b/docs/Manifest.toml deleted file mode 100644 index 93dd06bdc..000000000 --- a/docs/Manifest.toml +++ /dev/null @@ -1,427 +0,0 @@ -# This file is machine-generated - editing it directly is not advised - -[[AbstractTrees]] -deps = ["Markdown"] -git-tree-sha1 = "33e450545eaf7699da1a6e755f9ea65f14077a45" -uuid = "1520ce14-60c1-5f80-bbc7-55ef81b5835c" -version = "0.3.3" - -[[ArnoldiMethod]] -deps = ["DelimitedFiles", "LinearAlgebra", "Random", "SparseArrays", "StaticArrays", "Test"] -git-tree-sha1 = "2b6845cea546604fb4dca4e31414a6a59d39ddcd" -uuid = "ec485272-7323-5ecc-a04f-4719b315124d" -version = "0.0.4" - -[[AutoHashEquals]] -git-tree-sha1 = "45bb6705d93be619b81451bb2006b7ee5d4e4453" -uuid = "15f4f7f2-30c1-5605-9d31-71845cf9641f" -version = "0.2.0" - -[[Base64]] -uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" - -[[BenchmarkTools]] -deps = ["JSON", "Logging", "Printf", "Statistics", "UUIDs"] -git-tree-sha1 = "9e62e66db34540a0c919d72172cc2f642ac71260" -uuid = "6e4b80f9-dd63-53aa-95a3-0cdb28fa8baf" -version = "0.5.0" - -[[BinaryProvider]] -deps = ["Libdl", "Logging", "SHA"] -git-tree-sha1 = "ecdec412a9abc8db54c0efc5548c64dfce072058" -uuid = "b99e7846-7c00-51b0-8f62-c81ae34c0232" -version = "0.5.10" - -[[Bzip2_jll]] -deps = ["Libdl", "Pkg"] -git-tree-sha1 = "3663bfffede2ef41358b6fc2e1d8a6d50b3c3904" -uuid = "6e34b625-4abd-537c-b88f-471c36dfa7a0" -version = "1.0.6+2" - -[[Catlab]] -deps = ["AutoHashEquals", "Compat", "Compose", "DataStructures", "IterativeSolvers", "JSON", "LightGraphs", "LightXML", "LinearAlgebra", "LinearMaps", "LinearOperators", "Logging", "Match", "MetaGraphs", "Pkg", "Random", "Reexport", "Requires", "SparseArrays", "StaticArrays", "Statistics", "Test"] -path = ".." -uuid = "134e5e36-593f-5add-ad60-77f754baafbe" -version = "0.7.0" - -[[CodecBzip2]] -deps = ["Bzip2_jll", "Libdl", "TranscodingStreams"] -git-tree-sha1 = "2e62a725210ce3c3c2e1a3080190e7ca491f18d7" -uuid = "523fee87-0ab8-5b00-afb7-3ecf72e48cfd" -version = "0.7.2" - 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-[[Compose]] -deps = ["Base64", "Colors", "DataStructures", "Dates", "IterTools", "JSON", "LinearAlgebra", "Measures", "Printf", "Random", "Requires", "Statistics", "UUIDs"] -git-tree-sha1 = "157b75f64c26f36b55b5456dff08e524e591ec8d" -uuid = "a81c6b42-2e10-5240-aca2-a61377ecd94b" -version = "0.9.0" - -[[Convex]] -deps = ["AbstractTrees", "BenchmarkTools", "LinearAlgebra", "MathOptInterface", "OrderedCollections", "SparseArrays", "Test"] -git-tree-sha1 = "e6d2623466542997041356971d1f02e570b4319a" -uuid = "f65535da-76fb-5f13-bab9-19810c17039a" -version = "0.13.3" - -[[DataStructures]] -deps = ["InteractiveUtils", "OrderedCollections"] -git-tree-sha1 = "edad9434967fdc0a2631a65d902228400642120c" -uuid = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8" -version = "0.17.19" - -[[Dates]] -deps = ["Printf"] -uuid = "ade2ca70-3891-5945-98fb-dc099432e06a" - -[[DelimitedFiles]] -deps = ["Mmap"] -uuid = "8bb1440f-4735-579b-a4ab-409b98df4dab" - -[[Distributed]] -deps = ["Random", "Serialization", "Sockets"] -uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" - 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