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In #10 I implemented some steps to convert a channel of project directories to a channel where the processed rds files are represented as a list in the following form:
I expect that this type of function will be generally useful, so it would be nice to have a single function to repeat that performs that transformation. This function would have options for SCE/rds files or Anndata/hdf5 files. We might also have an option to get other files from a project, such as the metadata or bulk data.
The text was updated successfully, but these errors were encountered:
In #10 I implemented some steps to convert a channel of project directories to a channel where the processed rds files are represented as a list in the following form:
[project_id, sample_id, [processed_rds1, processed_rds2, ...]]
I expect that this type of function will be generally useful, so it would be nice to have a single function to repeat that performs that transformation. This function would have options for SCE/
rds
files or Anndata/hdf5
files. We might also have an option to get other files from a project, such as the metadata or bulk data.The text was updated successfully, but these errors were encountered: