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Test fix for docker actions failing after miniforge #744

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merged 2 commits into from
Sep 3, 2024

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jashapiro
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Looking at the changes made in #740, I think the most likely culprit for the failures in #743 is that I had removed adding conda.sh to /etc/profile.d. It seems possible (likely) that GHA isn't activating .bashrc when running its jobs, but hope it is the fix. I am just including the cell-type-ewings module for now. If this works after testing, I will add the same changes to all docker files and instructions.

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👍🏻 if it passes

@jaclyn-taroni
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@jashapiro - the analysis module is what is failing?

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@jashapiro - the analysis module is what is failing?

The analysis module failed because it is still pulling the old Docker image, yes.

@jashapiro jashapiro merged commit f9f1386 into AlexsLemonade:main Sep 3, 2024
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@jashapiro jashapiro deleted the 743-GHA-fix-test branch November 8, 2024 14:01
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2 participants