Update analyses/metacells/scripts/run-seacells.py

Co-authored-by: Stephanie Spielman <[email protected]>
AlexsLemonade · Jul 29, 2024 · 38994bc · 38994bc
1 parent f28ae54
commit 38994bc
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/analyses/metacells/scripts/run-seacells.py b/analyses/metacells/scripts/run-seacells.py
@@ -82,7 +82,7 @@ def run_seacells(
     """
 
     if adata.n_obs < min_cells:
-        raise ValueError("The dataset must have at least 20 cells to run SEACells")
+        raise ValueError(f"The dataset must have at least {min_cells} cells to run SEACells")
     # reformat the data for compatibility with SEACells and scanpy downstream
     adata = convert_adata(adata)